BLASTX nr result

ID: Scutellaria24_contig00033423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033423
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555072.1| PREDICTED: cleavage stimulation factor subun...   156   2e-36
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat...   155   3e-36
ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun...   155   4e-36
ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subun...   150   8e-35

>ref|XP_003555072.1| PREDICTED: cleavage stimulation factor subunit 3-like [Glycine max]
          Length = 832

 Score =  156 bits (394), Expect = 2e-36
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = +2

Query: 2   KKYVDEIDWNMLAIPPTGSPKEEMQWMAWKKLLTFEKGNPQRIDNVSANKRIAFAYEQCL 181
           KKYVDEIDWNMLA+PPTGS KEEMQWMAWK+LL+FEKGNPQRID  S+NKRI F YEQCL
Sbjct: 278 KKYVDEIDWNMLAVPPTGSYKEEMQWMAWKRLLSFEKGNPQRIDTASSNKRIIFTYEQCL 337

Query: 182 MYLYHYPDIWYDYTMWHAK 238
           M++YHYPDIWYDY  WHAK
Sbjct: 338 MHMYHYPDIWYDYATWHAK 356


>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
           gi|223541464|gb|EEF43014.1| plant RNA cleavage
           stimulation factor, putative [Ricinus communis]
          Length = 767

 Score =  155 bits (392), Expect = 3e-36
 Identities = 65/79 (82%), Positives = 72/79 (91%)
 Frame = +2

Query: 2   KKYVDEIDWNMLAIPPTGSPKEEMQWMAWKKLLTFEKGNPQRIDNVSANKRIAFAYEQCL 181
           KKYVD+IDWN+LA+PPTGS KEE+QWMAWK+ L FEKGNPQRID+VS+NKRI F YEQCL
Sbjct: 220 KKYVDDIDWNLLAVPPTGSYKEELQWMAWKRFLAFEKGNPQRIDSVSSNKRIIFTYEQCL 279

Query: 182 MYLYHYPDIWYDYTMWHAK 238
           MYLYHYPDIWYDY  WHAK
Sbjct: 280 MYLYHYPDIWYDYATWHAK 298


>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
           gi|297736046|emb|CBI24084.3| unnamed protein product
           [Vitis vinifera]
          Length = 769

 Score =  155 bits (391), Expect = 4e-36
 Identities = 65/80 (81%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   KKYVDEIDWNMLAIPPTGSPKEEMQWMAWKKLLTFEKGNPQRIDNVSANKRIAFAYEQCL 181
           KKYVDEIDWNMLA+PPTG+ KEEMQWMAWKK L FEKGNPQRID+ S+NKRI + YEQCL
Sbjct: 219 KKYVDEIDWNMLAVPPTGTSKEEMQWMAWKKFLAFEKGNPQRIDSNSSNKRILYTYEQCL 278

Query: 182 MYLYHYPDIWYDYTMWHAKS 241
           MYLYHYPDIWYDY  WHA++
Sbjct: 279 MYLYHYPDIWYDYATWHARN 298


>ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|222840916|gb|EEE78463.1|
           predicted protein [Populus trichocarpa]
          Length = 769

 Score =  153 bits (386), Expect = 2e-35
 Identities = 66/80 (82%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   KKYVDEIDWNMLAIPPTGSPKEEMQWMAWKKLLTFEKGNPQRIDNVSANKRIAFAYEQCL 181
           KKYVDEID+NMLA+PPTGS KEE QWMAWK+ LTFEKGNPQRID+VS+NKRI F YEQCL
Sbjct: 222 KKYVDEIDYNMLAVPPTGSFKEEQQWMAWKRFLTFEKGNPQRIDSVSSNKRIIFTYEQCL 281

Query: 182 MYLYHYPDIWYDYTMWHAKS 241
           MYLYHY D+WYDY  WHAKS
Sbjct: 282 MYLYHYQDVWYDYATWHAKS 301


>ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis
           sativus]
          Length = 871

 Score =  150 bits (380), Expect = 8e-35
 Identities = 62/80 (77%), Positives = 72/80 (90%)
 Frame = +2

Query: 2   KKYVDEIDWNMLAIPPTGSPKEEMQWMAWKKLLTFEKGNPQRIDNVSANKRIAFAYEQCL 181
           KKYVDEID NMLA+PPTGS KEE+QWM+W++L+ FEKGNPQRID+ S+NKRI F YEQCL
Sbjct: 324 KKYVDEIDCNMLAVPPTGSSKEELQWMSWRRLIAFEKGNPQRIDSASSNKRIIFTYEQCL 383

Query: 182 MYLYHYPDIWYDYTMWHAKS 241
           MYLYHYPD+WYDY MWHA +
Sbjct: 384 MYLYHYPDVWYDYAMWHASN 403


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