BLASTX nr result

ID: Scutellaria24_contig00033351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033351
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...    69   3e-10
emb|CBI17233.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...    64   1e-08
ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...    62   6e-08
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...    62   6e-08

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = -3

Query: 130 QKINNPKAFAFTSSVKAKRLQA*ATEKEQKILHVPTIDRTTGE 2
           +K +NPKAFAF+SSVKAKRLQ+ ATEKEQ+ LH+PTIDR+TGE
Sbjct: 41  EKKHNPKAFAFSSSVKAKRLQSRATEKEQRRLHIPTIDRSTGE 83


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = -3

Query: 130 QKINNPKAFAFTSSVKAKRLQA*ATEKEQKILHVPTIDRTTGE 2
           +K +NPKAFAF+SSVKAKRLQ+ ATEKEQ+ LH+PTIDR+TGE
Sbjct: 41  EKKHNPKAFAFSSSVKAKRLQSRATEKEQRRLHIPTIDRSTGE 83


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = -3

Query: 130 QKINNPKAFAFTSSVKAKRLQA*ATEKEQKILHVPTIDRTTGE 2
           +K  NPKAFAF SSVKAKRLQ+ A EKEQ+ LHVPTIDR+ GE
Sbjct: 41  EKKQNPKAFAFNSSVKAKRLQSRAVEKEQRRLHVPTIDRSYGE 83


>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
           [Cucumis sativus]
          Length = 532

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/45 (68%), Positives = 34/45 (75%)
 Frame = -3

Query: 136 ERQKINNPKAFAFTSSVKAKRLQA*ATEKEQKILHVPTIDRTTGE 2
           E  +  NPKAFAF SSVKAKRLQA + EKEQ+ LHVP IDR  GE
Sbjct: 40  ENDRKRNPKAFAFNSSVKAKRLQARSVEKEQRRLHVPVIDRCYGE 84


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 1198

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/45 (68%), Positives = 34/45 (75%)
 Frame = -3

Query: 136 ERQKINNPKAFAFTSSVKAKRLQA*ATEKEQKILHVPTIDRTTGE 2
           E  +  NPKAFAF SSVKAKRLQA + EKEQ+ LHVP IDR  GE
Sbjct: 40  ENDRKRNPKAFAFNSSVKAKRLQARSVEKEQRRLHVPVIDRCYGE 84


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