BLASTX nr result

ID: Scutellaria24_contig00033257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033257
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana] ...    91   7e-17
gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidops...    91   7e-17
ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, par...    91   1e-16
ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cuc...    91   1e-16
gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]        91   1e-16

>ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
           gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3'
           exoribonuclease 4; AltName: Full=Protein ACC INSENSITIVE
           1; AltName: Full=Protein ETHYLENE INSENSITIVE 5;
           AltName: Full=Protein EXORIBONUCLEASE 4
           gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis
           thaliana] gi|17381112|gb|AAL36368.1| putative
           exonuclease [Arabidopsis thaliana]
           gi|20259665|gb|AAM14350.1| putative exonuclease
           [Arabidopsis thaliana] gi|109627646|gb|ABG34298.1|
           At1g54490 [Arabidopsis thaliana]
           gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4
           [Arabidopsis thaliana]
          Length = 947

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = -3

Query: 235 FNLEGAKLLPKEKTETSDSNVITPGTPFMAVLSVALQYYVQSRLNHIPGWRFLKV 71
           F +EG  L  KEK ET DSNVITPGTPFMA+LSVALQYY+QSRLNH PGWR++KV
Sbjct: 140 FEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYYIQSRLNHNPGWRYVKV 194


>gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
          Length = 965

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = -3

Query: 235 FNLEGAKLLPKEKTETSDSNVITPGTPFMAVLSVALQYYVQSRLNHIPGWRFLKV 71
           F +EG  L  KEK ET DSNVITPGTPFMA+LSVALQYY+QSRLNH PGWR++KV
Sbjct: 140 FEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYYIQSRLNHNPGWRYVKV 194


>ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
          Length = 254

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/55 (80%), Positives = 44/55 (80%)
 Frame = -3

Query: 235 FNLEGAKLLPKEKTETSDSNVITPGTPFMAVLSVALQYYVQSRLNHIPGWRFLKV 71
           F  EG  LLPKEK ET DSNVITPGT FM VLSVALQYY QSRLNH PGWRF KV
Sbjct: 140 FEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQSRLNHNPGWRFTKV 194


>ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
          Length = 934

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/55 (80%), Positives = 44/55 (80%)
 Frame = -3

Query: 235 FNLEGAKLLPKEKTETSDSNVITPGTPFMAVLSVALQYYVQSRLNHIPGWRFLKV 71
           F  EG  LLPKEK ET DSNVITPGT FM VLSVALQYY QSRLNH PGWRF KV
Sbjct: 140 FEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQSRLNHNPGWRFTKV 194


>gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
          Length = 934

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/55 (80%), Positives = 44/55 (80%)
 Frame = -3

Query: 235 FNLEGAKLLPKEKTETSDSNVITPGTPFMAVLSVALQYYVQSRLNHIPGWRFLKV 71
           F  EG  LLPKEK ET DSNVITPGT FM VLSVALQYY QSRLNH PGWRF KV
Sbjct: 140 FEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQSRLNHNPGWRFTKV 194


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