BLASTX nr result

ID: Scutellaria24_contig00033160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033160
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...    65   4e-09
emb|CBI25851.3| unnamed protein product [Vitis vinifera]               65   8e-09
ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
emb|CAN68810.1| hypothetical protein VITISV_001082 [Vitis vinifera]    63   3e-08
ref|XP_003604902.1| Pentatricopeptide repeat-containing protein ...    62   6e-08

>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 26/58 (44%), Positives = 45/58 (77%)
 Frame = -3

Query: 175 YCSTAAESFLTHLQKDENALIERALNTVKGKLDSRCITQVLERCAIDKPQLGVRFFVW 2
           + ++ A+   THLQ + N  +E++LN++K KLD+RC+T+VL +C+++  Q+G+RFFVW
Sbjct: 26  FTTSLADKLYTHLQNNPNN-VEKSLNSIKPKLDTRCVTEVLHKCSLNNSQIGLRFFVW 82


>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
 Frame = -3

Query: 220 KSPAFS-VKRFLLF-----NPYCSTA---AESFLTHLQKDENALIERALNTVKGKLDSRC 68
           KS AFS V R L +     NP  STA   AE + THLQK  +  IE+ L  V+ KLDS C
Sbjct: 5   KSMAFSSVSRLLPYSIRHKNPNFSTALSSAEKYYTHLQKYGDN-IEKTLPAVRAKLDSSC 63

Query: 67  ITQVLERCAIDKPQLGVRFFVW 2
           + +VL RC++ + QLG+RFF+W
Sbjct: 64  VNEVLNRCSLTQSQLGLRFFIW 85


>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
 Frame = -3

Query: 205 SVKRFLLF-----NPYCSTA---AESFLTHLQKDENALIERALNTVKGKLDSRCITQVLE 50
           SV R L +     NP  STA   AE + THLQK  +  IE+ L  V+ KLDS C+ +VL 
Sbjct: 5   SVSRLLPYSIRHKNPNFSTALSSAEKYYTHLQKYGDN-IEKTLPAVRAKLDSSCVNEVLN 63

Query: 49  RCAIDKPQLGVRFFVW 2
           RC++ + QLG+RFF+W
Sbjct: 64  RCSLTQSQLGLRFFIW 79


>emb|CAN68810.1| hypothetical protein VITISV_001082 [Vitis vinifera]
          Length = 577

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
 Frame = -3

Query: 205 SVKRFLLF-----NPYCSTA---AESFLTHLQKDENALIERALNTVKGKLDSRCITQVLE 50
           SV R L +     NP  STA   AE + THLQK  +  IE+ L  V+ KLDS C+ +VL 
Sbjct: 5   SVSRLLPYSIRHKNPNFSTALSPAEKYYTHLQKYGDN-IEKTLPAVRAKLDSSCVNEVLN 63

Query: 49  RCAIDKPQLGVRFFVW 2
           RC++ + QLG+RFF+W
Sbjct: 64  RCSLTQSQLGLRFFIW 79


>ref|XP_003604902.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355505957|gb|AES87099.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 449

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = -3

Query: 169 STAAESFLTHLQKDENALIERALNTVKGKLDSRCITQVLERCAIDKPQLGVRFFVW 2
           S+ A++  THL K     IE AL+  K KLDS+C+ QVL +C   + QLGVRFF+W
Sbjct: 4   SSIADTLYTHLNKTNGITIENALSKTKPKLDSQCVIQVLNKCFPKQSQLGVRFFIW 59


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