BLASTX nr result

ID: Scutellaria24_contig00033156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033156
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGB07400.1| 60S ribosomal protein L10a, partial [Coccomyxa pr...    57   1e-06
gb|EIE25331.1| 60S ribosomal protein L10a [Coccomyxa subellipsoi...    57   2e-06
gb|AGB07415.1| 60S ribosomal protein L10a, partial [Trebouxia as...    57   2e-06
gb|AFA28222.1| 60S ribosomal protein L10a, partial [Trebouxia si...    56   3e-06
gb|AFA28221.1| 60S ribosomal protein L10a, partial [Trebouxia an...    56   3e-06

>gb|AGB07400.1| 60S ribosomal protein L10a, partial [Coccomyxa pringsheimii]
           gi|432152309|gb|AGB07406.1| 60S ribosomal protein L10a,
           partial [Coccomyxa subellipsoidea]
          Length = 99

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
 Frame = +2

Query: 2   AFLASEAVIKQIPRLLGPGLNKAGKYHLQMDVNSSSSYFMSEIVV-----LKRIYCLAM 163
           AFLASEAVIKQIPRLLGPGLNKAGK+   +  N      ++EI       LK++ CL +
Sbjct: 10  AFLASEAVIKQIPRLLGPGLNKAGKFPTLVSHNDKLEEKVNEIKASVKFQLKKVLCLGV 68


>gb|EIE25331.1| 60S ribosomal protein L10a [Coccomyxa subellipsoidea C-169]
          Length = 216

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
 Frame = +2

Query: 2   AFLASEAVIKQIPRLLGPGLNKAGKYHLQMDVNSSSSYFMSEIVV-----LKRIYCLAM 163
           AFLASEAVIKQIPRLLGPGLNKAGK+   +  N      ++EI       LK++ CL +
Sbjct: 108 AFLASEAVIKQIPRLLGPGLNKAGKFPTLVSHNDKLEDKVNEIKASVKFQLKKVLCLGV 166


>gb|AGB07415.1| 60S ribosomal protein L10a, partial [Trebouxia asymmetrica]
          Length = 85

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
 Frame = +2

Query: 2   AFLASEAVIKQIPRLLGPGLNKAGKYHLQMDVNSSSSYFMSEIVV-----LKRIYCLAM 163
           AFLASE VIKQIPRLLGPGLNKAGK+   +  N S    ++EI       LK++ C+ +
Sbjct: 10  AFLASETVIKQIPRLLGPGLNKAGKFPALVSHNESLEAKVNEIKASIKFQLKKVLCMGV 68


>gb|AFA28222.1| 60S ribosomal protein L10a, partial [Trebouxia simplex]
          Length = 83

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
 Frame = +2

Query: 2   AFLASEAVIKQIPRLLGPGLNKAGKYHLQMDVNSSSSYFMSEIVV-----LKRIYCLAM 163
           AFLASE VIKQIPRLLGPGLNKAGK+   +  N S    ++EI       LK++ C+ +
Sbjct: 5   AFLASETVIKQIPRLLGPGLNKAGKFPTLVSHNESLEGKVNEIKASIKFQLKKVLCMGV 63


>gb|AFA28221.1| 60S ribosomal protein L10a, partial [Trebouxia angustilobata]
          Length = 90

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
 Frame = +2

Query: 2   AFLASEAVIKQIPRLLGPGLNKAGKYHLQMDVNSSSSYFMSEIVV-----LKRIYCLAM 163
           AFLASE VIKQIPRLLGPGLNKAGK+   +  N S    ++EI       LK++ C+ +
Sbjct: 5   AFLASETVIKQIPRLLGPGLNKAGKFPTLVSHNESLEGKVNEIKASIKFQLKKVLCMGV 63