BLASTX nr result

ID: Scutellaria24_contig00033152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033152
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532055.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_003619486.1| Ribosomal protein-like protein [Medicago tru...    56   4e-06

>ref|XP_002532055.1| conserved hypothetical protein [Ricinus communis]
           gi|223528277|gb|EEF30327.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/60 (58%), Positives = 40/60 (66%)
 Frame = -2

Query: 255 MIVEDEGVEVTNWYDDENDGPLQYVGGPNQEFQDYLQRSFELLDNQVHHQLNADLTEHIW 76
           MIVEDEG  +TN  DD+ D  +     P Q FQ YLQRS EL D +VHHQL +DL EHIW
Sbjct: 1   MIVEDEGDAITNLDDDDKDTMILVNQAPVQGFQHYLQRSTELRDGEVHHQLRSDLVEHIW 60


>ref|XP_003619486.1| Ribosomal protein-like protein [Medicago truncatula]
           gi|355494501|gb|AES75704.1| Ribosomal protein-like
           protein [Medicago truncatula]
          Length = 386

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = -2

Query: 255 MIVEDE----GVEVTNWYDDENDGPLQYVGGPNQEFQDYLQRSFELLDNQVHHQLNADLT 88
           MIVEDE    G     +YD   +GP       N +FQ++L+R + + D Q+H QL  DL 
Sbjct: 319 MIVEDERATYGGTFDYFYDHLGNGPTAPSDDSNNDFQEFLRRRYNIRDKQIHRQLQQDLI 378

Query: 87  EHIWAR 70
           EHIW R
Sbjct: 379 EHIWER 384


Top