BLASTX nr result

ID: Scutellaria24_contig00033124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033124
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t...    70   2e-10
ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07
ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
gb|ADE77588.1| unknown [Picea sitchensis]                              55   5e-06

>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/70 (55%), Positives = 52/70 (74%)
 Frame = -1

Query: 324 CDLYAKSGRFDDQKTIRSLMKEKDVRKSVPGSSMIEVDGVVYEFSMKGSPEIPIEALQSI 145
           CD+YAK+G FD  K IR++MKEK + K +PG SMIE++G V EFS  GS E+P++ L  +
Sbjct: 471 CDIYAKAGMFDAAKRIRNIMKEKRIEKKIPGCSMIEINGEVQEFSAGGSSELPMKELVLV 530

Query: 144 LMVLSNEMKL 115
           L  LSNEMK+
Sbjct: 531 LNGLSNEMKI 540


>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 541

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/71 (47%), Positives = 50/71 (70%)
 Frame = -1

Query: 327 LCDLYAKSGRFDDQKTIRSLMKEKDVRKSVPGSSMIEVDGVVYEFSMKGSPEIPIEALQS 148
           LCD+Y K+G++D  K IR+ MKE+ +   +PG S+IE++GVV EFS+    EIP++ L  
Sbjct: 474 LCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSV---GEIPMKELPL 530

Query: 147 ILMVLSNEMKL 115
           +L  L NEMK+
Sbjct: 531 VLDRLRNEMKI 541


>ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/72 (38%), Positives = 46/72 (63%)
 Frame = -1

Query: 327 LCDLYAKSGRFDDQKTIRSLMKEKDVRKSVPGSSMIEVDGVVYEFSMKGSPEIPIEALQS 148
           L ++YA SG +D    +R +MK+ D+RK  PG S IE+DGV++EF ++       + + S
Sbjct: 475 LSNMYASSGNWDGVAAVRLMMKDMDIRKD-PGCSWIEIDGVIHEFLVEDDSHSRAKDIHS 533

Query: 147 ILMVLSNEMKLE 112
           +L  +SN++ LE
Sbjct: 534 MLEEISNKLSLE 545


>ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Vitis vinifera]
          Length = 590

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/73 (41%), Positives = 48/73 (65%)
 Frame = -1

Query: 330 ILCDLYAKSGRFDDQKTIRSLMKEKDVRKSVPGSSMIEVDGVVYEFSMKGSPEIPIEALQ 151
           +L ++YA + R+DD   +R LMK+K +RK  PGSS+IEVDG  +EF +  +     E + 
Sbjct: 513 LLSNIYATNERWDDVTRVRRLMKDKGIRK-FPGSSVIEVDGEAHEFLVGDTNHSRNEDIH 571

Query: 150 SILMVLSNEMKLE 112
            +L +L+N++ LE
Sbjct: 572 ILLNILANQVYLE 584


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/71 (39%), Positives = 47/71 (66%)
 Frame = -1

Query: 330 ILCDLYAKSGRFDDQKTIRSLMKEKDVRKSVPGSSMIEVDGVVYEFSMKGSPEIPIEALQ 151
           +L ++YA +GR+DD   +R +MKEKDV+KS PG S+IEV+  ++ F +        EA+ 
Sbjct: 148 LLSNIYAAAGRWDDVAKVRKMMKEKDVKKS-PGCSLIEVNNKLHSFVVGDISHPQTEAIY 206

Query: 150 SILMVLSNEMK 118
           ++L  L+ +M+
Sbjct: 207 AMLETLARQME 217


Top