BLASTX nr result

ID: Scutellaria24_contig00033110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033110
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thal...   126   2e-27
ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar...   126   2e-27
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...   123   1e-26
ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25

>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/93 (70%), Positives = 74/93 (79%)
 Frame = -1

Query: 280 ILGPAAHRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAIVLVKGNRMNLFWDFL 101
           +LGP AHRDP K  LGL KALEF+YWVET FGFQH+E+TCREMA VL +GN +   WDFL
Sbjct: 98  VLGPGAHRDPFKAKLGLNKALEFFYWVETHFGFQHDEITCREMACVLARGNTLMGLWDFL 157

Query: 100 KNMSGRYKKVNLVTTATMTCLIKALGEEGLVNE 2
           K MS R +   LVTTAT+TCLIK LGEEGLVNE
Sbjct: 158 KEMS-RRENGGLVTTATITCLIKVLGEEGLVNE 189


>gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thaliana]
          Length = 410

 Score =  126 bits (316), Expect = 2e-27
 Identities = 54/93 (58%), Positives = 73/93 (78%)
 Frame = -1

Query: 280 ILGPAAHRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAIVLVKGNRMNLFWDFL 101
           +LGP A+ DP+K+++GL+KALEF++W+ET FGF HNE+TCR+MA +L KGN     WDFL
Sbjct: 91  VLGPGAYMDPKKVSIGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFL 150

Query: 100 KNMSGRYKKVNLVTTATMTCLIKALGEEGLVNE 2
           + +S R    N+VTTA++TCL+K LGEEG V E
Sbjct: 151 RQVSRRENGKNVVTTASITCLMKCLGEEGFVKE 183


>ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332197853|gb|AEE35974.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 458

 Score =  126 bits (316), Expect = 2e-27
 Identities = 54/93 (58%), Positives = 73/93 (78%)
 Frame = -1

Query: 280 ILGPAAHRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAIVLVKGNRMNLFWDFL 101
           +LGP A+ DP+K+++GL+KALEF++W+ET FGF HNE+TCR+MA +L KGN     WDFL
Sbjct: 91  VLGPGAYMDPKKVSIGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFL 150

Query: 100 KNMSGRYKKVNLVTTATMTCLIKALGEEGLVNE 2
           + +S R    N+VTTA++TCL+K LGEEG V E
Sbjct: 151 RQVSRRENGKNVVTTASITCLMKCLGEEGFVKE 183


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score =  123 bits (309), Expect = 1e-26
 Identities = 54/93 (58%), Positives = 72/93 (77%)
 Frame = -1

Query: 280 ILGPAAHRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAIVLVKGNRMNLFWDFL 101
           +LGP A+ DP+K++LGL+KALEF++W+E  FGF HNE+TCR+MA +L KGN     WDFL
Sbjct: 91  VLGPGAYIDPKKISLGLQKALEFFFWIEIHFGFGHNEITCRDMACLLAKGNDFKGLWDFL 150

Query: 100 KNMSGRYKKVNLVTTATMTCLIKALGEEGLVNE 2
           + +S R    N+VTTA++TCL+K LGEEG V E
Sbjct: 151 RQVSRRENGKNVVTTASITCLMKCLGEEGFVKE 183


>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/87 (62%), Positives = 68/87 (78%)
 Frame = -1

Query: 262 HRDPRKLNLGLEKALEFYYWVETQFGFQHNELTCREMAIVLVKGNRMNLFWDFLKNMSGR 83
           +RDP K+ LG+EKA+EFY WVETQFGF HNE+TCREM  VL +GNR+ + W+FL  M+ R
Sbjct: 90  YRDPHKVKLGVEKAMEFYSWVETQFGFSHNEMTCREMGCVLARGNRLKVLWEFLHEMA-R 148

Query: 82  YKKVNLVTTATMTCLIKALGEEGLVNE 2
                +VTTAT+TCL+K LGEEGL N+
Sbjct: 149 KGGNGVVTTATITCLMKVLGEEGLANQ 175


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