BLASTX nr result

ID: Scutellaria24_contig00033099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00033099
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   134   8e-30
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   134   8e-30
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   134   8e-30
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   134   8e-30
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]       133   2e-29

>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/91 (69%), Positives = 72/91 (79%)
 Frame = +3

Query: 3   VAWLTEQYQNYQANIEQPKPPAINLDEGLVYVRRVQVTPTKVYFAGPEVNVSNRVLRAFH 182
           V WLTEQY  Y    + PK P+I LD+GLVYVRRV VTP KVYF GPEVNVSNRVLR + 
Sbjct: 326 VRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 385

Query: 183 DHIDNFLRVSFVDEEWDKMYSTDLSPRVAAG 275
           + IDNFLRVSFVDEEW+K+YSTDL P+ + G
Sbjct: 386 EDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 416


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/91 (69%), Positives = 72/91 (79%)
 Frame = +3

Query: 3   VAWLTEQYQNYQANIEQPKPPAINLDEGLVYVRRVQVTPTKVYFAGPEVNVSNRVLRAFH 182
           V WLTEQY  Y    + PK P+I LD+GLVYVRRV VTP KVYF GPEVNVSNRVLR + 
Sbjct: 318 VRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 377

Query: 183 DHIDNFLRVSFVDEEWDKMYSTDLSPRVAAG 275
           + IDNFLRVSFVDEEW+K+YSTDL P+ + G
Sbjct: 378 EDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 408


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/91 (69%), Positives = 72/91 (79%)
 Frame = +3

Query: 3   VAWLTEQYQNYQANIEQPKPPAINLDEGLVYVRRVQVTPTKVYFAGPEVNVSNRVLRAFH 182
           V WLTEQY  Y    + PK P+I LD+GLVYVRRV VTP KVYF GPEVNVSNRVLR + 
Sbjct: 292 VRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 351

Query: 183 DHIDNFLRVSFVDEEWDKMYSTDLSPRVAAG 275
           + IDNFLRVSFVDEEW+K+YSTDL P+ + G
Sbjct: 352 EDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 382


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/91 (69%), Positives = 72/91 (79%)
 Frame = +3

Query: 3   VAWLTEQYQNYQANIEQPKPPAINLDEGLVYVRRVQVTPTKVYFAGPEVNVSNRVLRAFH 182
           V WLTEQY  Y    + PK P+I LD+GLVYVRRV VTP KVYF GPEVNVSNRVLR + 
Sbjct: 326 VRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 385

Query: 183 DHIDNFLRVSFVDEEWDKMYSTDLSPRVAAG 275
           + IDNFLRVSFVDEEW+K+YSTDL P+ + G
Sbjct: 386 EDIDNFLRVSFVDEEWEKLYSTDLLPKASTG 416


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/91 (69%), Positives = 73/91 (80%)
 Frame = +3

Query: 3   VAWLTEQYQNYQANIEQPKPPAINLDEGLVYVRRVQVTPTKVYFAGPEVNVSNRVLRAFH 182
           V WLTEQY  Y    + PK P+I LD+GLVYVRRV VTP KVYF+GPEVNVSNRVLR + 
Sbjct: 326 VRWLTEQYDEYLKRRQLPKSPSITLDDGLVYVRRVVVTPCKVYFSGPEVNVSNRVLRNYS 385

Query: 183 DHIDNFLRVSFVDEEWDKMYSTDLSPRVAAG 275
           + IDNFLRVSFVDEEW+K++STDL PR + G
Sbjct: 386 EDIDNFLRVSFVDEEWEKIHSTDLLPRASTG 416


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