BLASTX nr result

ID: Scutellaria24_contig00032920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032920
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]   166   2e-39
ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat...   165   3e-39
emb|CBI28441.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat...   153   1e-35
ref|XP_003609218.1| Pentatricopeptide repeat-containing protein ...   152   4e-35

>emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/103 (75%), Positives = 88/103 (85%)
 Frame = +3

Query: 9    NVLIWRTILGACGRANGRLLDLGTRAAHKIMELEPQNAVNYVLVANMYASSEKWEHVEEA 188
            NVLIWRT+LGAC RANGR  +LG RAA  ++ELEPQNAVNYVL+ANMYAS EKWE V +A
Sbjct: 1334 NVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKA 1393

Query: 189  RHAMKVAAARKEAGCSWVTMKDGIHVFVSGDKSHPETDSIYEK 317
            R AMK AA +KEAGCSWVTMKDG+HVFV+GDK HPE D IY+K
Sbjct: 1394 RXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDK 1436


>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/103 (75%), Positives = 88/103 (85%)
 Frame = +3

Query: 9    NVLIWRTILGACGRANGRLLDLGTRAAHKIMELEPQNAVNYVLVANMYASSEKWEHVEEA 188
            NVLIWRT+LGAC RANGR  +LG RAA  ++ELEPQNAVNYVL+ANMYAS EKWE V +A
Sbjct: 860  NVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKA 919

Query: 189  RHAMKVAAARKEAGCSWVTMKDGIHVFVSGDKSHPETDSIYEK 317
            R AMK AA +KEAGCSWVTMKDG+HVFV+GDK HPE D IY+K
Sbjct: 920  RTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDK 962


>emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/103 (75%), Positives = 88/103 (85%)
 Frame = +3

Query: 9    NVLIWRTILGACGRANGRLLDLGTRAAHKIMELEPQNAVNYVLVANMYASSEKWEHVEEA 188
            NVLIWRT+LGAC RANGR  +LG RAA  ++ELEPQNAVNYVL+ANMYAS EKWE V +A
Sbjct: 708  NVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKA 767

Query: 189  RHAMKVAAARKEAGCSWVTMKDGIHVFVSGDKSHPETDSIYEK 317
            R AMK AA +KEAGCSWVTMKDG+HVFV+GDK HPE D IY+K
Sbjct: 768  RTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDK 810


>ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
            gi|449506934|ref|XP_004162888.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/103 (68%), Positives = 84/103 (81%)
 Frame = +3

Query: 9    NVLIWRTILGACGRANGRLLDLGTRAAHKIMELEPQNAVNYVLVANMYASSEKWEHVEEA 188
            NVLIWRT+LGAC RANGR   LG RAA  ++E+EP NAVNY+L++NMYAS  KW+ V + 
Sbjct: 862  NVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKT 921

Query: 189  RHAMKVAAARKEAGCSWVTMKDGIHVFVSGDKSHPETDSIYEK 317
            R AM+ A  +KEAGCSWVTMKDG+HVFV+GDKSHPE D IYEK
Sbjct: 922  RVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEK 964


>ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355510273|gb|AES91415.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  152 bits (383), Expect = 4e-35
 Identities = 69/105 (65%), Positives = 87/105 (82%)
 Frame = +3

Query: 3    DLNVLIWRTILGACGRANGRLLDLGTRAAHKIMELEPQNAVNYVLVANMYASSEKWEHVE 182
            D N+LIWRT+LGAC RANGR  +LG RAA  ++ELEPQNAVNYVL++NM+A+   WE V 
Sbjct: 927  DPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVV 986

Query: 183  EARHAMKVAAARKEAGCSWVTMKDGIHVFVSGDKSHPETDSIYEK 317
            EAR AM+ AA +K+AGCSWV MKDG+H+FV+GD++HPE + IYEK
Sbjct: 987  EARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEK 1031


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