BLASTX nr result

ID: Scutellaria24_contig00032893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032893
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25

>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/103 (65%), Positives = 83/103 (80%)
 Frame = +3

Query: 3   VRKEVGRSWIEVRGNIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEVG 182
           V+K  G+SWIEVRG  HVF AGDR H R +E+ AKL EL+ +IEKLGYVP   E LH+VG
Sbjct: 443 VKKISGKSWIEVRGEAHVFLAGDRNHERAEEMNAKLKELVGEIEKLGYVPVCSETLHKVG 502

Query: 183 DEQKRELLWYHSEKLAVAYGLLNGVTPPGKPLRIVKNLRICKD 311
           +++++E L YHSEKLA+AYG+L GV PPGK LRI+KNLRIC+D
Sbjct: 503 EKERKEALLYHSEKLALAYGILTGVAPPGKALRIIKNLRICRD 545


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/103 (64%), Positives = 76/103 (73%)
 Frame = +3

Query: 3   VRKEVGRSWIEVRGNIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEVG 182
           V+K+ GRSWIEV+G +HVF AGD +H R  EIY KL ELM DIEKLGY            
Sbjct: 434 VKKKGGRSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGY------------ 481

Query: 183 DEQKRELLWYHSEKLAVAYGLLNGVTPPGKPLRIVKNLRICKD 311
            E+++E LWYHSEKLAVA+G+L G  PPGKPLRIVKNLRICKD
Sbjct: 482 -EKRKEALWYHSEKLAVAFGVLCGPAPPGKPLRIVKNLRICKD 523


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/103 (64%), Positives = 76/103 (73%)
 Frame = +3

Query: 3   VRKEVGRSWIEVRGNIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEVG 182
           V+K+ GRSWIEV+G +HVF AGD +H R  EIY KL ELM DIEKLGY            
Sbjct: 434 VKKKGGRSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGY------------ 481

Query: 183 DEQKRELLWYHSEKLAVAYGLLNGVTPPGKPLRIVKNLRICKD 311
            E+++E LWYHSEKLAVA+G+L G  PPGKPLRIVKNLRICKD
Sbjct: 482 -EKRKESLWYHSEKLAVAFGVLCGSAPPGKPLRIVKNLRICKD 523


>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/103 (64%), Positives = 75/103 (72%)
 Frame = +3

Query: 3   VRKEVGRSWIEVRGNIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEVG 182
           V+KE GRSWIEVRG +HVF AGDRRH R  EIYAKL ELM  IE+LGY            
Sbjct: 447 VKKEGGRSWIEVRGKVHVFLAGDRRHERSHEIYAKLVELMEKIEELGY-----------K 495

Query: 183 DEQKRELLWYHSEKLAVAYGLLNGVTPPGKPLRIVKNLRICKD 311
           +  K+E LWYHSEKLAVA+G+++   PPGK LRIVKNLRICKD
Sbjct: 496 EGVKKETLWYHSEKLAVAFGVVSDAAPPGKALRIVKNLRICKD 538


>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/103 (53%), Positives = 74/103 (71%)
 Frame = +3

Query: 3   VRKEVGRSWIEVRGNIHVFFAGDRRHSRKDEIYAKLTELMTDIEKLGYVPSWDEMLHEVG 182
           V+KE G SWIE+R +IHVF +  + H   ++IY K+ EL+T I  +GYVP    + H+V 
Sbjct: 565 VKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVE 624

Query: 183 DEQKRELLWYHSEKLAVAYGLLNGVTPPGKPLRIVKNLRICKD 311
           DEQKRE + YHSEKLA+AYGL+   TP G P+R++KNLR+C D
Sbjct: 625 DEQKREYVSYHSEKLAIAYGLMK--TPSGAPIRVIKNLRMCVD 665


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