BLASTX nr result
ID: Scutellaria24_contig00032858
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00032858
(522 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera] 191 7e-75
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max] 192 1e-74
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 191 2e-73
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2... 186 2e-73
dbj|BAF03051.1| DNA ligase IV [Populus nigra] 185 5e-73
>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 191 bits (484), Expect(2) = 7e-75
Identities = 92/108 (85%), Positives = 102/108 (94%)
Frame = -1
Query: 522 DRLASSDNRSEKISILSDLIRQTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 343
D LASS+NR+EK S+LS LI++TNAQEMKWI+MIILKDLKLGISEKSIFHEFHPDAEDLF
Sbjct: 134 DCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIFHEFHPDAEDLF 193
Query: 342 NVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAGAWKK 199
NVTCDLKLVCEKL+DRSQRHKRQDIEVGK VRPQLA+RV++A AWKK
Sbjct: 194 NVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKK 241
Score = 115 bits (287), Expect(2) = 7e-75
Identities = 53/66 (80%), Positives = 60/66 (90%)
Frame = -2
Query: 200 RNFLAHPEYGYGMSDIIRENILVDRCILDGEMLVWDKSTSRFAEFGSNQEIAKAARDGLD 21
RNFL HPEY Y MS+I+ +N+LVDRCILDGEMLVWD S +RFAEFGSNQEIAKAA++GLD
Sbjct: 272 RNFLDHPEYKYAMSNIVAQNLLVDRCILDGEMLVWDISLNRFAEFGSNQEIAKAAKEGLD 331
Query: 20 SDRQLC 3
SDRQLC
Sbjct: 332 SDRQLC 337
>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
Length = 1171
Score = 192 bits (487), Expect(2) = 1e-74
Identities = 94/108 (87%), Positives = 102/108 (94%)
Frame = -1
Query: 522 DRLASSDNRSEKISILSDLIRQTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 343
DRLAS++NR+EKI +LS LI++TNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF
Sbjct: 134 DRLASAENRAEKILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 193
Query: 342 NVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAGAWKK 199
NVTCDLKLVCEKLRDR+QRHKRQDIEVGK VRPQLA RV+NA AWKK
Sbjct: 194 NVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAWKK 241
Score = 113 bits (283), Expect(2) = 1e-74
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = -2
Query: 200 RNFLAHPEYGYGMSDIIRENILVDRCILDGEMLVWDKSTSRFAEFGSNQEIAKAARDGLD 21
RNF+ H EY + MS+II +N+LVDRCILDGEMLVWD S RFAEFGSNQEIAKAARDGLD
Sbjct: 272 RNFIDHSEYAHAMSEIIIQNVLVDRCILDGEMLVWDTSLKRFAEFGSNQEIAKAARDGLD 331
Query: 20 SDRQLC 3
SDRQLC
Sbjct: 332 SDRQLC 337
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 191 bits (484), Expect(2) = 2e-73
Identities = 92/108 (85%), Positives = 102/108 (94%)
Frame = -1
Query: 522 DRLASSDNRSEKISILSDLIRQTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 343
D LASS+NR+EK S+LS LI++TNAQEMKWI+MIILKDLKLGISEKSIFHEFHPDAEDLF
Sbjct: 134 DCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIFHEFHPDAEDLF 193
Query: 342 NVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAGAWKK 199
NVTCDLKLVCEKL+DRSQRHKRQDIEVGK VRPQLA+RV++A AWKK
Sbjct: 194 NVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKK 241
Score = 110 bits (275), Expect(2) = 2e-73
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = -2
Query: 200 RNFLAHPEYGYGMSDIIRENILVDRCILDGEMLVWDKSTSRFAEFGSNQEIAKAARDGLD 21
RNFL HPEY Y MS+I+ +N+LVDRCILDGEMLVWD S +RFAEFGSNQEIAKAA++GLD
Sbjct: 272 RNFLDHPEYKYAMSNIVAQNLLVDRCILDGEMLVWDISLNRFAEFGSNQEIAKAAKEGLD 331
Query: 20 SDRQL 6
SDRQ+
Sbjct: 332 SDRQV 336
>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
predicted protein [Populus trichocarpa]
Length = 1242
Score = 186 bits (473), Expect(2) = 2e-73
Identities = 89/108 (82%), Positives = 100/108 (92%)
Frame = -1
Query: 522 DRLASSDNRSEKISILSDLIRQTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 343
D+LASS+NR EK ++L+ LI +TN QEMKWIIMIILKDLKLG+SEKS+FHEFHPDAEDLF
Sbjct: 143 DKLASSENRGEKTAVLAALINKTNTQEMKWIIMIILKDLKLGMSEKSVFHEFHPDAEDLF 202
Query: 342 NVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAGAWKK 199
NVTCDLKLVCEKLRDR+QRHKRQDIEVGK VRPQLA+RVS+A AWKK
Sbjct: 203 NVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWKK 250
Score = 114 bits (285), Expect(2) = 2e-73
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = -2
Query: 200 RNFLAHPEYGYGMSDIIRENILVDRCILDGEMLVWDKSTSRFAEFGSNQEIAKAARDGLD 21
RNFL H EY +GMSDII +N+L +RCILDGEMLVWD S +RFAEFGSNQEIAKAARDGLD
Sbjct: 281 RNFLDHSEYAHGMSDIIVQNVLDERCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLD 340
Query: 20 SDRQLC 3
SDRQLC
Sbjct: 341 SDRQLC 346
>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
Length = 1319
Score = 185 bits (470), Expect(2) = 5e-73
Identities = 88/108 (81%), Positives = 100/108 (92%)
Frame = -1
Query: 522 DRLASSDNRSEKISILSDLIRQTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 343
D+LASS+NR +K ++L+ LI +TN QEMKWIIMIILKDLKLG+SEKS+FHEFHPDAEDLF
Sbjct: 143 DKLASSENRGDKTAVLAALINKTNTQEMKWIIMIILKDLKLGMSEKSVFHEFHPDAEDLF 202
Query: 342 NVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAGAWKK 199
NVTCDLKLVCEKLRDR+QRHKRQDIEVGK VRPQLA+RVS+A AWKK
Sbjct: 203 NVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWKK 250
Score = 114 bits (285), Expect(2) = 5e-73
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = -2
Query: 200 RNFLAHPEYGYGMSDIIRENILVDRCILDGEMLVWDKSTSRFAEFGSNQEIAKAARDGLD 21
RNFL H EY +GMSDII +N+L +RCILDGEMLVWD S +RFAEFGSNQEIAKAARDGLD
Sbjct: 281 RNFLDHSEYAHGMSDIIVQNVLDERCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLD 340
Query: 20 SDRQLC 3
SDRQLC
Sbjct: 341 SDRQLC 346