BLASTX nr result

ID: Scutellaria24_contig00032845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032845
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   166   2e-39
gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]              155   4e-36
ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis...   155   4e-36
dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombinat...   155   4e-36
ref|NP_566040.1| DNA repair protein RAD51-like 3 [Arabidopsis th...   155   4e-36

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  166 bits (420), Expect = 2e-39
 Identities = 82/97 (84%), Positives = 88/97 (90%)
 Frame = -2

Query: 293 GNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGKTQLG 114
           G+ AI+NGAQTAWDMLHEEES  CITTSC DLD+ILGGGI  KEVTEIGGVPGIGKTQLG
Sbjct: 64  GSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKTQLG 123

Query: 113 IQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQI 3
           IQLAVN QIP + GGLGGKAIYIDTEGSFM+ER+LQI
Sbjct: 124 IQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQI 160


>gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]
          Length = 363

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/97 (78%), Positives = 86/97 (88%)
 Frame = -2

Query: 293 GNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGKTQLG 114
           G+ +++NGA+ AWDMLHEEES   ITTSCSDLD ILGGGI  ++VTEIGGVPGIGKTQ+G
Sbjct: 81  GSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIG 140

Query: 113 IQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQI 3
           IQL+VN QIP + GGLGGKAIYIDTEGSFMVERALQI
Sbjct: 141 IQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQI 177


>ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
           gi|330255440|gb|AEC10534.1| DNA repair protein
           RAD51-like 3 [Arabidopsis thaliana]
          Length = 387

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/97 (78%), Positives = 86/97 (88%)
 Frame = -2

Query: 293 GNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGKTQLG 114
           G+ +++NGA+ AWDMLHEEES   ITTSCSDLD ILGGGI  ++VTEIGGVPGIGKTQ+G
Sbjct: 105 GSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIG 164

Query: 113 IQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQI 3
           IQL+VN QIP + GGLGGKAIYIDTEGSFMVERALQI
Sbjct: 165 IQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQI 201


>dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombination factor
           [Arabidopsis thaliana]
          Length = 342

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/97 (78%), Positives = 86/97 (88%)
 Frame = -2

Query: 293 GNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGKTQLG 114
           G+ +++NGA+ AWDMLHEEES   ITTSCSDLD ILGGGI  ++VTEIGGVPGIGKTQ+G
Sbjct: 60  GSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIG 119

Query: 113 IQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQI 3
           IQL+VN QIP + GGLGGKAIYIDTEGSFMVERALQI
Sbjct: 120 IQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQI 156


>ref|NP_566040.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
           gi|55583940|sp|Q8GXF0.2|RA51C_ARATH RecName: Full=DNA
           repair protein RAD51 homolog 3; AltName: Full=DNA
           repair-recombination protein RAD51C; Short=AtRAD51C
           gi|11064475|emb|CAC14294.1| Rad51C protein [Arabidopsis
           thaliana] gi|15425731|dbj|BAB64343.1| AtRAD51Calpha
           [Arabidopsis thaliana] gi|20196911|gb|AAB82635.2|
           putative RAD51C-like DNA repair protein [Arabidopsis
           thaliana] gi|330255439|gb|AEC10533.1| DNA repair protein
           RAD51-like 3 [Arabidopsis thaliana]
          Length = 363

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/97 (78%), Positives = 86/97 (88%)
 Frame = -2

Query: 293 GNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGKTQLG 114
           G+ +++NGA+ AWDMLHEEES   ITTSCSDLD ILGGGI  ++VTEIGGVPGIGKTQ+G
Sbjct: 81  GSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIG 140

Query: 113 IQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQI 3
           IQL+VN QIP + GGLGGKAIYIDTEGSFMVERALQI
Sbjct: 141 IQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQI 177


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