BLASTX nr result

ID: Scutellaria24_contig00032819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032819
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]    164   7e-39
gb|AAF98584.1|AC013427_27 Strong similarity to RNA helicase (HRH...   163   1e-38
ref|NP_173961.3| helicase associated domain-containing protein [...   163   1e-38
dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Gro...   159   2e-37
ref|NP_001057036.1| Os06g0192500 [Oryza sativa Japonica Group] g...   159   2e-37

>dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  164 bits (415), Expect = 7e-39
 Identities = 81/112 (72%), Positives = 94/112 (83%)
 Frame = -2

Query: 338 KSRSSGVSNMAHNQSKNLSPLKLIIMSASLDAQVFSQYFGGARAVHVQGRQHPVDILYTH 159
           K   S VS +   Q    +PLKLIIMSASLDA+ FS YFGGA+AVH+QGRQ+PVD LYT+
Sbjct: 188 KQDHSQVSTLKACQGIKTAPLKLIIMSASLDAKCFSDYFGGAKAVHIQGRQYPVDTLYTY 247

Query: 158 QPETDYVDATLITIFQIHLEEGPGDILVFLTGQEEIESIERLVQERLPKLPA 3
           QPE+DY+DATL+TIFQIHLEEGPGDIL FLTGQEEIES+ERL+QER  +LPA
Sbjct: 248 QPESDYLDATLVTIFQIHLEEGPGDILAFLTGQEEIESLERLIQERARQLPA 299


>gb|AAF98584.1|AC013427_27 Strong similarity to RNA helicase (HRH1) from Homo sapiens
           gb|D50487 and contains a Helicases conserved C-terminal
           PF|00271 domain. EST gb|AV567077 comes from this gene
           [Arabidopsis thaliana]
          Length = 726

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/98 (81%), Positives = 89/98 (90%)
 Frame = -2

Query: 299 QSKNLSPLKLIIMSASLDAQVFSQYFGGARAVHVQGRQHPVDILYTHQPETDYVDATLIT 120
           Q + LSPLKLIIMSASLDA+VFS+YFGGA+AVHVQGRQ PVDILYT  PE+DYVDATL+T
Sbjct: 231 QGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVT 290

Query: 119 IFQIHLEEGPGDILVFLTGQEEIESIERLVQERLPKLP 6
           IFQIH EE PGDILVFLTGQ+EIES+ERLVQERL  +P
Sbjct: 291 IFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIP 328


>ref|NP_173961.3| helicase associated domain-containing protein [Arabidopsis
           thaliana] gi|332192562|gb|AEE30683.1| helicase
           associated domain-containing protein [Arabidopsis
           thaliana]
          Length = 717

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/98 (81%), Positives = 89/98 (90%)
 Frame = -2

Query: 299 QSKNLSPLKLIIMSASLDAQVFSQYFGGARAVHVQGRQHPVDILYTHQPETDYVDATLIT 120
           Q + LSPLKLIIMSASLDA+VFS+YFGGA+AVHVQGRQ PVDILYT  PE+DYVDATL+T
Sbjct: 222 QGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVT 281

Query: 119 IFQIHLEEGPGDILVFLTGQEEIESIERLVQERLPKLP 6
           IFQIH EE PGDILVFLTGQ+EIES+ERLVQERL  +P
Sbjct: 282 IFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIP 319


>dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Group]
           gi|51091123|dbj|BAD35820.1| putative RNA helicase [Oryza
           sativa Japonica Group]
          Length = 698

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/98 (76%), Positives = 88/98 (89%)
 Frame = -2

Query: 299 QSKNLSPLKLIIMSASLDAQVFSQYFGGARAVHVQGRQHPVDILYTHQPETDYVDATLIT 120
           Q   + PLKLIIMSASLDA+ FS YFG A+AVH+QGRQ+PVDILYT+QPE+DY+DATL+T
Sbjct: 202 QGTKIDPLKLIIMSASLDAKCFSDYFGSAKAVHIQGRQYPVDILYTYQPESDYLDATLVT 261

Query: 119 IFQIHLEEGPGDILVFLTGQEEIESIERLVQERLPKLP 6
           IFQIHLEEGPGDIL FLTGQEEIES++RL+QER  +LP
Sbjct: 262 IFQIHLEEGPGDILAFLTGQEEIESLDRLIQERARQLP 299


>ref|NP_001057036.1| Os06g0192500 [Oryza sativa Japonica Group]
           gi|51090787|dbj|BAD35265.1| RNA helicase-like [Oryza
           sativa Japonica Group] gi|51091124|dbj|BAD35821.1| RNA
           helicase-like [Oryza sativa Japonica Group]
           gi|113595076|dbj|BAF18950.1| Os06g0192500 [Oryza sativa
           Japonica Group]
          Length = 386

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/98 (76%), Positives = 88/98 (89%)
 Frame = -2

Query: 299 QSKNLSPLKLIIMSASLDAQVFSQYFGGARAVHVQGRQHPVDILYTHQPETDYVDATLIT 120
           Q   + PLKLIIMSASLDA+ FS YFG A+AVH+QGRQ+PVDILYT+QPE+DY+DATL+T
Sbjct: 202 QGTKIDPLKLIIMSASLDAKCFSDYFGSAKAVHIQGRQYPVDILYTYQPESDYLDATLVT 261

Query: 119 IFQIHLEEGPGDILVFLTGQEEIESIERLVQERLPKLP 6
           IFQIHLEEGPGDIL FLTGQEEIES++RL+QER  +LP
Sbjct: 262 IFQIHLEEGPGDILAFLTGQEEIESLDRLIQERARQLP 299


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