BLASTX nr result

ID: Scutellaria24_contig00032786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032786
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   194   5e-48
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...   193   1e-47
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...   193   1e-47
ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g...   192   3e-47
ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel...   191   7e-47

>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  194 bits (494), Expect = 5e-48
 Identities = 98/109 (89%), Positives = 104/109 (95%)
 Frame = -3

Query: 328  YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149
            YV+VRQ EK+ LAKLLDRVPIP+KESLEE SAKINVLLQAYISQLKLEGLSLTSDMV+IT
Sbjct: 1030 YVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIT 1089

Query: 148  QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2
            QSAGRLMRALFEIVLKRGWAQLAEKAL LCKM+ +RMWSVQTPLRQFHG
Sbjct: 1090 QSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVNKRMWSVQTPLRQFHG 1138


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
            200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score =  193 bits (490), Expect = 1e-47
 Identities = 97/109 (88%), Positives = 104/109 (95%)
 Frame = -3

Query: 328  YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149
            YV+VRQ EK+ LAKLL+RVPIP+KESLEE SAKINVLLQAYISQLKLEGLSLTSDMV+IT
Sbjct: 1055 YVTVRQDEKMELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIT 1114

Query: 148  QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2
            QSAGRLMRALFEIVLKRGWAQLAEKAL LCKM+ +RMWSVQTPLRQFHG
Sbjct: 1115 QSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG 1163


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Cucumis sativus]
          Length = 2175

 Score =  193 bits (490), Expect = 1e-47
 Identities = 97/109 (88%), Positives = 104/109 (95%)
 Frame = -3

Query: 328  YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149
            YV+VRQ EK+ LAKLL+RVPIP+KESLEE SAKINVLLQAYISQLKLEGLSLTSDMV+IT
Sbjct: 1055 YVTVRQDEKMELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIT 1114

Query: 148  QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2
            QSAGRLMRALFEIVLKRGWAQLAEKAL LCKM+ +RMWSVQTPLRQFHG
Sbjct: 1115 QSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG 1163


>ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata]
            gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 2171

 Score =  192 bits (487), Expect = 3e-47
 Identities = 97/109 (88%), Positives = 104/109 (95%)
 Frame = -3

Query: 328  YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149
            YV+VRQ EK+ LAKLLDRVPIP+KE+LEE SAKINVLLQAYISQLKLEGLSLTSDMVYIT
Sbjct: 1050 YVTVRQDEKMELAKLLDRVPIPIKETLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYIT 1109

Query: 148  QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2
            QSAGRL+RAL+EIVLKRGWAQLAEKAL L KM+GRRMWSVQTPLRQFHG
Sbjct: 1110 QSAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGRRMWSVQTPLRQFHG 1158


>ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
            thaliana] gi|334182730|ref|NP_001185050.1| putative U5
            small nuclear ribonucleoprotein helicase [Arabidopsis
            thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative
            RNA helicase [Arabidopsis thaliana]
            gi|332191925|gb|AEE30046.1| putative U5 small nuclear
            ribonucleoprotein helicase [Arabidopsis thaliana]
            gi|332191926|gb|AEE30047.1| putative U5 small nuclear
            ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2171

 Score =  191 bits (484), Expect = 7e-47
 Identities = 96/109 (88%), Positives = 104/109 (95%)
 Frame = -3

Query: 328  YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149
            YV+VRQ EK+ LAKLLDRVPIP+KE+LEE SAKINVLLQAYISQLKLEGLSLTSDMVYIT
Sbjct: 1050 YVTVRQDEKMELAKLLDRVPIPIKETLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYIT 1109

Query: 148  QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2
            QSAGRL+RAL+EIVLKRGWAQLAEKAL L KM+G+RMWSVQTPLRQFHG
Sbjct: 1110 QSAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGKRMWSVQTPLRQFHG 1158


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