BLASTX nr result
ID: Scutellaria24_contig00032786
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Scutellaria24_contig00032786 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2... 194 5e-48 ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 193 1e-47 ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 193 1e-47 ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g... 192 3e-47 ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel... 191 7e-47 >ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1| predicted protein [Populus trichocarpa] Length = 2157 Score = 194 bits (494), Expect = 5e-48 Identities = 98/109 (89%), Positives = 104/109 (95%) Frame = -3 Query: 328 YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149 YV+VRQ EK+ LAKLLDRVPIP+KESLEE SAKINVLLQAYISQLKLEGLSLTSDMV+IT Sbjct: 1030 YVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIT 1089 Query: 148 QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2 QSAGRLMRALFEIVLKRGWAQLAEKAL LCKM+ +RMWSVQTPLRQFHG Sbjct: 1090 QSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVNKRMWSVQTPLRQFHG 1138 >ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase-like [Cucumis sativus] Length = 2175 Score = 193 bits (490), Expect = 1e-47 Identities = 97/109 (88%), Positives = 104/109 (95%) Frame = -3 Query: 328 YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149 YV+VRQ EK+ LAKLL+RVPIP+KESLEE SAKINVLLQAYISQLKLEGLSLTSDMV+IT Sbjct: 1055 YVTVRQDEKMELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIT 1114 Query: 148 QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2 QSAGRLMRALFEIVLKRGWAQLAEKAL LCKM+ +RMWSVQTPLRQFHG Sbjct: 1115 QSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG 1163 >ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like [Cucumis sativus] Length = 2175 Score = 193 bits (490), Expect = 1e-47 Identities = 97/109 (88%), Positives = 104/109 (95%) Frame = -3 Query: 328 YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149 YV+VRQ EK+ LAKLL+RVPIP+KESLEE SAKINVLLQAYISQLKLEGLSLTSDMV+IT Sbjct: 1055 YVTVRQDEKMELAKLLERVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIT 1114 Query: 148 QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2 QSAGRLMRALFEIVLKRGWAQLAEKAL LCKM+ +RMWSVQTPLRQFHG Sbjct: 1115 QSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHG 1163 >ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] Length = 2171 Score = 192 bits (487), Expect = 3e-47 Identities = 97/109 (88%), Positives = 104/109 (95%) Frame = -3 Query: 328 YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149 YV+VRQ EK+ LAKLLDRVPIP+KE+LEE SAKINVLLQAYISQLKLEGLSLTSDMVYIT Sbjct: 1050 YVTVRQDEKMELAKLLDRVPIPIKETLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYIT 1109 Query: 148 QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2 QSAGRL+RAL+EIVLKRGWAQLAEKAL L KM+GRRMWSVQTPLRQFHG Sbjct: 1110 QSAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGRRMWSVQTPLRQFHG 1158 >ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gi|334182730|ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gi|332191925|gb|AEE30046.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gi|332191926|gb|AEE30047.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] Length = 2171 Score = 191 bits (484), Expect = 7e-47 Identities = 96/109 (88%), Positives = 104/109 (95%) Frame = -3 Query: 328 YVSVRQAEKLALAKLLDRVPIPVKESLEESSAKINVLLQAYISQLKLEGLSLTSDMVYIT 149 YV+VRQ EK+ LAKLLDRVPIP+KE+LEE SAKINVLLQAYISQLKLEGLSLTSDMVYIT Sbjct: 1050 YVTVRQDEKMELAKLLDRVPIPIKETLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYIT 1109 Query: 148 QSAGRLMRALFEIVLKRGWAQLAEKALKLCKMIGRRMWSVQTPLRQFHG 2 QSAGRL+RAL+EIVLKRGWAQLAEKAL L KM+G+RMWSVQTPLRQFHG Sbjct: 1110 QSAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGKRMWSVQTPLRQFHG 1158