BLASTX nr result

ID: Scutellaria24_contig00032705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032705
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...   171   4e-41
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...   171   4e-41
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   167   1e-39
ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793...   164   5e-39
ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38

>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1143

 Score =  171 bits (434), Expect = 4e-41
 Identities = 77/85 (90%), Positives = 82/85 (96%)
 Frame = +1

Query: 43  TAGWPNFLCVCSVFSSGSVQLHWSQWPPNQSGAPTKWFCTSKGLLGAGPSGIMAADAIVT 222
           +A WPNFLCVCSVFSSGSVQLHWSQWPP+Q+ +P KWFCTSKGLLGAGPSGIMAADAI+T
Sbjct: 137 SARWPNFLCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCTSKGLLGAGPSGIMAADAIIT 196

Query: 223 DSGAMHVAGVPIVNPSTVVVWEVTP 297
           DSGAMHVAGVPIVNPSTVVVWEVTP
Sbjct: 197 DSGAMHVAGVPIVNPSTVVVWEVTP 221


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1220

 Score =  171 bits (434), Expect = 4e-41
 Identities = 77/85 (90%), Positives = 82/85 (96%)
 Frame = +1

Query: 43  TAGWPNFLCVCSVFSSGSVQLHWSQWPPNQSGAPTKWFCTSKGLLGAGPSGIMAADAIVT 222
           +A WPNFLCVCSVFSSGSVQLHWSQWPP+Q+ +P KWFCTSKGLLGAGPSGIMAADAI+T
Sbjct: 214 SARWPNFLCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCTSKGLLGAGPSGIMAADAIIT 273

Query: 223 DSGAMHVAGVPIVNPSTVVVWEVTP 297
           DSGAMHVAGVPIVNPSTVVVWEVTP
Sbjct: 274 DSGAMHVAGVPIVNPSTVVVWEVTP 298


>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
           gi|223541698|gb|EEF43246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1255

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/85 (89%), Positives = 81/85 (95%)
 Frame = +1

Query: 43  TAGWPNFLCVCSVFSSGSVQLHWSQWPPNQSGAPTKWFCTSKGLLGAGPSGIMAADAIVT 222
           +A WPNFLCVCSVFSSGSVQLHWSQWPP+++ A  +WFCTSKGLLGAGPSGIMAADAIVT
Sbjct: 252 SARWPNFLCVCSVFSSGSVQLHWSQWPPSRTNATPEWFCTSKGLLGAGPSGIMAADAIVT 311

Query: 223 DSGAMHVAGVPIVNPSTVVVWEVTP 297
           DSGAMHVAGVPIVNPSTVVVWEVTP
Sbjct: 312 DSGAMHVAGVPIVNPSTVVVWEVTP 336


>ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793949 [Glycine max]
          Length = 1244

 Score =  164 bits (416), Expect = 5e-39
 Identities = 73/85 (85%), Positives = 77/85 (90%)
 Frame = +1

Query: 43  TAGWPNFLCVCSVFSSGSVQLHWSQWPPNQSGAPTKWFCTSKGLLGAGPSGIMAADAIVT 222
           +A WPNFLCVCSVFSSGSVQLHWSQWPP Q+G   KWFCTSKGLLG GPSGIMA DAI+T
Sbjct: 253 SARWPNFLCVCSVFSSGSVQLHWSQWPPTQNGTTPKWFCTSKGLLGCGPSGIMAGDAIIT 312

Query: 223 DSGAMHVAGVPIVNPSTVVVWEVTP 297
           DSGAMHVAGVPIVNPST+VVWEV P
Sbjct: 313 DSGAMHVAGVPIVNPSTIVVWEVAP 337


>ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|222848774|gb|EEE86321.1|
           predicted protein [Populus trichocarpa]
          Length = 1328

 Score =  162 bits (410), Expect = 3e-38
 Identities = 74/82 (90%), Positives = 77/82 (93%)
 Frame = +1

Query: 52  WPNFLCVCSVFSSGSVQLHWSQWPPNQSGAPTKWFCTSKGLLGAGPSGIMAADAIVTDSG 231
           WPNFLCVCSVFSSGSVQLHWSQWPP+Q+    KWF TSKGLLGAGPSGIMAADAI+TDSG
Sbjct: 279 WPNFLCVCSVFSSGSVQLHWSQWPPSQNNTSPKWFRTSKGLLGAGPSGIMAADAIITDSG 338

Query: 232 AMHVAGVPIVNPSTVVVWEVTP 297
           AMHVAGVPIVNPSTVVVWEVTP
Sbjct: 339 AMHVAGVPIVNPSTVVVWEVTP 360


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