BLASTX nr result

ID: Scutellaria24_contig00032702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032702
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148818.1| PREDICTED: putative transcription elongation...   178   4e-43
ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis...   178   4e-43
ref|XP_002313759.1| global transcription factor group [Populus t...   177   8e-43
ref|XP_002872391.1| hypothetical protein ARALYDRAFT_327088 [Arab...   175   4e-42
ref|XP_003634397.1| PREDICTED: putative transcription elongation...   174   5e-42

>ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like [Cucumis sativus]
          Length = 1044

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/101 (86%), Positives = 91/101 (90%)
 Frame = -3

Query: 304 KCAIGHEREVAVCLMQKCIDKGSEMQIRSVVALDHLKNYIYIEADKEAHVREAVKGMRNI 125
           KCAIG ERE AVCLMQKCID+G EMQIRS VALDHLKN+IYIEADKEAHVREA KG+RNI
Sbjct: 185 KCAIGREREAAVCLMQKCIDRGPEMQIRSAVALDHLKNFIYIEADKEAHVREACKGLRNI 244

Query: 124 YPSKILLVPIKEMTDVLSVESKTIDISRDTWVRMKIGMYKG 2
           Y  KI LVPIKEMTDVLSVESK ID+SRDTWVRMKIG YKG
Sbjct: 245 YAQKITLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKG 285


>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
           gi|223534550|gb|EEF36249.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 1045

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/101 (86%), Positives = 92/101 (91%)
 Frame = -3

Query: 304 KCAIGHEREVAVCLMQKCIDKGSEMQIRSVVALDHLKNYIYIEADKEAHVREAVKGMRNI 125
           KCAIG ERE AVCLMQK IDKGSE+QIRS +ALDHLKNYIYIEADKEAHVREA KG+RNI
Sbjct: 189 KCAIGRERETAVCLMQKYIDKGSELQIRSAIALDHLKNYIYIEADKEAHVREACKGLRNI 248

Query: 124 YPSKILLVPIKEMTDVLSVESKTIDISRDTWVRMKIGMYKG 2
           Y  KI+LVPIKEMTDVLSVESK ID+SRDTWVRMKIG YKG
Sbjct: 249 YAQKIMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKG 289


>ref|XP_002313759.1| global transcription factor group [Populus trichocarpa]
           gi|222850167|gb|EEE87714.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1042

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/101 (86%), Positives = 93/101 (92%)
 Frame = -3

Query: 304 KCAIGHEREVAVCLMQKCIDKGSEMQIRSVVALDHLKNYIYIEADKEAHVREAVKGMRNI 125
           KCAIG ERE AVCLMQK IDKGSE+QIRSVVALDHLKNYIYIEADKEAHVREA KG+RNI
Sbjct: 193 KCAIGRERETAVCLMQKYIDKGSELQIRSVVALDHLKNYIYIEADKEAHVREACKGLRNI 252

Query: 124 YPSKILLVPIKEMTDVLSVESKTIDISRDTWVRMKIGMYKG 2
           +  KI+LVPI+EMTDVLSVESK ID+SRDTWVRMKIG YKG
Sbjct: 253 FGQKIMLVPIREMTDVLSVESKVIDLSRDTWVRMKIGTYKG 293


>ref|XP_002872391.1| hypothetical protein ARALYDRAFT_327088 [Arabidopsis lyrata subsp.
           lyrata] gi|297318228|gb|EFH48650.1| hypothetical protein
           ARALYDRAFT_327088 [Arabidopsis lyrata subsp. lyrata]
          Length = 1051

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/102 (84%), Positives = 96/102 (94%), Gaps = 1/102 (0%)
 Frame = -3

Query: 304 KCAIGHEREVAVCLMQKCIDKGSEMQIRSVVALDHLKNYIYIEADKEAHVREAVKGMRNI 125
           KCAIG EREVAVCLMQK ID+G+++QIRSVVALDHLKNYIY+EADKEAHV+EA+KGMRNI
Sbjct: 185 KCAIGREREVAVCLMQKFIDRGADLQIRSVVALDHLKNYIYVEADKEAHVKEAIKGMRNI 244

Query: 124 YPS-KILLVPIKEMTDVLSVESKTIDISRDTWVRMKIGMYKG 2
           Y + KILLVPI+EMTDVLSVESK ID+SRDTWVRMKIG YKG
Sbjct: 245 YSNQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKG 286


>ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like isoform 2 [Vitis vinifera]
          Length = 1044

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/101 (81%), Positives = 92/101 (91%)
 Frame = -3

Query: 304 KCAIGHEREVAVCLMQKCIDKGSEMQIRSVVALDHLKNYIYIEADKEAHVREAVKGMRNI 125
           KCAIGHERE AVCLMQK IDKG E+QIRS +ALDHLKNYIYIEADKEAHV+EA KG+RNI
Sbjct: 181 KCAIGHEREAAVCLMQKSIDKGPEVQIRSAIALDHLKNYIYIEADKEAHVKEACKGLRNI 240

Query: 124 YPSKILLVPIKEMTDVLSVESKTIDISRDTWVRMKIGMYKG 2
           Y  K++LVPI+EMTDVLSVESK +D+SR+TWVRMKIG YKG
Sbjct: 241 YAQKVMLVPIREMTDVLSVESKAVDLSRNTWVRMKIGTYKG 281


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