BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032671
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636929.1| Ribulose bisphosphate carboxylase small chai...   132   4e-29
sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carbox...   130   1e-28
ref|XP_003636956.1| Ribulose bisphosphate carboxylase small chai...   130   1e-28
ref|XP_003637843.1| Ribulose bisphosphate carboxylase small chai...   129   2e-28
ref|XP_003637842.1| Ribulose bisphosphate carboxylase small chai...   129   2e-28

>ref|XP_003636929.1| Ribulose bisphosphate carboxylase small chain 3A [Medicago
           truncatula] gi|355502864|gb|AES84067.1| Ribulose
           bisphosphate carboxylase small chain 3A [Medicago
           truncatula]
          Length = 613

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/83 (80%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
 Frame = -3

Query: 243 ASMISSTAVTTVNRASPAQ--AVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 70
           +SMISS+A+TTVNRASP Q  AVAPF GLKSMAGFP+TK N DITSI SNG RVNCMQVW
Sbjct: 3   SSMISSSAITTVNRASPVQSGAVAPFVGLKSMAGFPITKVNKDITSITSNGGRVNCMQVW 62

Query: 69  PTQGMKKFETLSYLPPLTPEQLA 1
           P  G KKFETLSYLPPLT EQLA
Sbjct: 63  PPIGKKKFETLSYLPPLTREQLA 85


>sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|3044116|gb|AAC13293.1|
           ribulose-1,5-bisphosphate carboxylase small subunit
           [Medicago sativa]
          Length = 180

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/83 (84%), Positives = 72/83 (86%), Gaps = 3/83 (3%)
 Frame = -3

Query: 240 SMISSTAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKK-NNDITSIASNGSRVNCMQVW 70
           ++ISS AVTTVNRAS AQA  VAPFTGLKS AGFPVTKK NNDITSIASNG RVNCMQVW
Sbjct: 2   ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVW 61

Query: 69  PTQGMKKFETLSYLPPLTPEQLA 1
           P  G KKFETLSYLPPLT EQLA
Sbjct: 62  PPVGKKKFETLSYLPPLTEEQLA 84


>ref|XP_003636956.1| Ribulose bisphosphate carboxylase small chain 3A [Medicago
           truncatula] gi|355502891|gb|AES84094.1| Ribulose
           bisphosphate carboxylase small chain 3A [Medicago
           truncatula]
          Length = 175

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/88 (77%), Positives = 73/88 (82%), Gaps = 2/88 (2%)
 Frame = -3

Query: 258 KKEEMASMISSTAVTTVNRASPAQ--AVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVN 85
           +K+  +SMISS+A+TTVNRAS  Q  AVAPF GLKSMAGFPVTK N DITSI SNG RVN
Sbjct: 67  RKKMASSMISSSAMTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVN 126

Query: 84  CMQVWPTQGMKKFETLSYLPPLTPEQLA 1
           CMQVWP  G KKFETLSYLPPLT EQLA
Sbjct: 127 CMQVWPPIGKKKFETLSYLPPLTREQLA 154



 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/67 (77%), Positives = 55/67 (82%), Gaps = 2/67 (2%)
 Frame = -3

Query: 243 ASMISSTAVTTVNRASPAQ--AVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 70
           +SM+SS+AVTTVNRAS  Q  AVAPF GLKSMAGFPVTK N DITSI SNG RVNCMQVW
Sbjct: 3   SSMMSSSAVTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVNCMQVW 62

Query: 69  PTQGMKK 49
           P  G KK
Sbjct: 63  PPIGRKK 69


>ref|XP_003637843.1| Ribulose bisphosphate carboxylase small chain 3A [Medicago
           truncatula] gi|355503778|gb|AES84981.1| Ribulose
           bisphosphate carboxylase small chain 3A [Medicago
           truncatula]
          Length = 181

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/83 (81%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = -3

Query: 243 ASMISSTAVTTVNRASPAQ--AVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 70
           +SMISS+AVTTVNRAS  Q  AVAPF GLKSMAGFPVTK N DITSI SNG RVNCMQVW
Sbjct: 3   SSMISSSAVTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVNCMQVW 62

Query: 69  PTQGMKKFETLSYLPPLTPEQLA 1
           P  G KKFETLSYLPPLT EQLA
Sbjct: 63  PPIGKKKFETLSYLPPLTREQLA 85


>ref|XP_003637842.1| Ribulose bisphosphate carboxylase small chain 3A [Medicago
           truncatula] gi|355503777|gb|AES84980.1| Ribulose
           bisphosphate carboxylase small chain 3A [Medicago
           truncatula]
          Length = 106

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/83 (81%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = -3

Query: 243 ASMISSTAVTTVNRASPAQ--AVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 70
           +SMISS+AVTTVNRAS  Q  AVAPF GLKSMAGFPVTK N DITSI SNG RVNCMQVW
Sbjct: 3   SSMISSSAVTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVNCMQVW 62

Query: 69  PTQGMKKFETLSYLPPLTPEQLA 1
           P  G KKFETLSYLPPLT EQLA
Sbjct: 63  PPIGKKKFETLSYLPPLTREQLA 85