BLASTX nr result

ID: Scutellaria24_contig00032614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032614
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589659.1| DNA gyrase subunit A [Medicago truncatula] g...   102   5e-20
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...   102   5e-20
ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s...    99   5e-19
ref|XP_002526325.1| DNA gyrase subunit A, chloroplast/mitochondr...    97   1e-18
ref|XP_002315402.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18

>ref|XP_003589659.1| DNA gyrase subunit A [Medicago truncatula]
           gi|355478707|gb|AES59910.1| DNA gyrase subunit A
           [Medicago truncatula]
          Length = 992

 Score =  102 bits (253), Expect = 5e-20
 Identities = 58/90 (64%), Positives = 65/90 (72%)
 Frame = -1

Query: 527 AVKASSRRKEEEPQENASAVAVRDVGSNGGEGSDGRIVVTELHKEATEAYMSYAMSVLLG 348
           A  AS RR E E   N S   V +  S+  + S+GRIV+TELHKEATEAYM+YAMSVLLG
Sbjct: 48  AAAASVRRDEPERDGNGSVTVVDNGSSDVVKRSEGRIVLTELHKEATEAYMAYAMSVLLG 107

Query: 347 RALPDVRDGLKPVHRRIL*VVCADFAMPDL 258
           RALPDVRDGLKPVHRRIL      FAM +L
Sbjct: 108 RALPDVRDGLKPVHRRIL------FAMHEL 131


>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
           Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
           subunit [Nicotiana benthamiana]
          Length = 935

 Score =  102 bits (253), Expect = 5e-20
 Identities = 54/75 (72%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = -1

Query: 515 SSRRKEEEP-QENASAVAVRDVGSNGGEGSDGRIVVTELHKEATEAYMSYAMSVLLGRAL 339
           S+RRKEEE   E   +V +RD G N       R+V+TELHKEATEAYMSYAMSVLLGRAL
Sbjct: 57  SARRKEEEVGDEGNGSVILRDRGENEDRNGGERVVLTELHKEATEAYMSYAMSVLLGRAL 116

Query: 338 PDVRDGLKPVHRRIL 294
           PDVRDGLKPVHRRIL
Sbjct: 117 PDVRDGLKPVHRRIL 131


>ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
           chloroplastic/mitochondrial-like [Glycine max]
          Length = 924

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/94 (58%), Positives = 67/94 (71%)
 Frame = -1

Query: 539 RRFSAVKASSRRKEEEPQENASAVAVRDVGSNGGEGSDGRIVVTELHKEATEAYMSYAMS 360
           RR ++   S+RR+++E   N S        ++ G  S+GR+V TELHKEATEAYM+YAMS
Sbjct: 43  RRPASAFRSARRRDDE---NGSVTTAASATTDNGYVSEGRVVPTELHKEATEAYMAYAMS 99

Query: 359 VLLGRALPDVRDGLKPVHRRIL*VVCADFAMPDL 258
           VLLGRALPDVRDGLKPVHRRIL      FAM +L
Sbjct: 100 VLLGRALPDVRDGLKPVHRRIL------FAMHEL 127


>ref|XP_002526325.1| DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative
           [Ricinus communis] gi|223534352|gb|EEF36061.1| DNA
           gyrase subunit A, chloroplast/mitochondrial precursor,
           putative [Ricinus communis]
          Length = 540

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 58/94 (61%), Positives = 67/94 (71%)
 Frame = -1

Query: 539 RRFSAVKASSRRKEEEPQENASAVAVRDVGSNGGEGSDGRIVVTELHKEATEAYMSYAMS 360
           R +++ K  S   EE+   N S + V+D  SNGG   D R+V TELHKEATEAYM+YAMS
Sbjct: 76  RVYTSAKEESHSNEEQ---NGSLLVVKD--SNGGR--DARVVHTELHKEATEAYMAYAMS 128

Query: 359 VLLGRALPDVRDGLKPVHRRIL*VVCADFAMPDL 258
           VLLGRALPDVRDGLKPVHRRIL      FAM +L
Sbjct: 129 VLLGRALPDVRDGLKPVHRRIL------FAMHEL 156


>ref|XP_002315402.1| predicted protein [Populus trichocarpa] gi|222864442|gb|EEF01573.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/88 (63%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
 Frame = -1

Query: 512 SRRKEE---EPQENASAVAVRDVGSNGGEGSDGRIVVTELHKEATEAYMSYAMSVLLGRA 342
           SRR+EE   +  EN S + V+D       G +GR+V TELHKEATEAYM+YAMSVLLGRA
Sbjct: 50  SRRREEPATDDSENGSLL-VKDPNGGSPGGGNGRVVQTELHKEATEAYMAYAMSVLLGRA 108

Query: 341 LPDVRDGLKPVHRRIL*VVCADFAMPDL 258
           LPDVRDGLKPVHRRIL      FAM +L
Sbjct: 109 LPDVRDGLKPVHRRIL------FAMHEL 130


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