BLASTX nr result

ID: Scutellaria24_contig00032604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032604
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ri...   117   8e-25
ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-...   114   1e-23
ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-...   112   2e-23
ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|NP_198669.1| tryptophan synthase beta chain [Arabidopsis tha...   101   7e-20

>ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ricinus communis]
           gi|223528911|gb|EEF30908.1| tryptophan synthase beta
           chain, putative [Ricinus communis]
          Length = 212

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/88 (62%), Positives = 69/88 (78%)
 Frame = -3

Query: 265 LSCFAPKKRDCHLRFLSGPKASAISTYAADSRAIEVPRQWYNLITDLPVKPPPFLHPKTF 86
           L  FA   +    +F +G +A A ++  AD +AI++PRQWYNL++DLPVKPPP L+PKT 
Sbjct: 29  LGGFALNTKSSPSKFSNGLRARAKASLNADQKAIQIPRQWYNLVSDLPVKPPPALNPKTH 88

Query: 85  EPVKPEDLAPLFPDELIKQEGTNERFID 2
           EPVKPEDLAPLFPDELIKQE +NE+FID
Sbjct: 89  EPVKPEDLAPLFPDELIKQEASNEKFID 116


>ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/95 (57%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
 Frame = -3

Query: 283 QADGQRL-SCFAPKKRDCHLRFLSGPKASAISTYAADSRAIEVPRQWYNLITDLPVKPPP 107
           +A G++L  C + K+   HLRF +G +  A S    + +A+EVPRQWYNL+ DLPVKPPP
Sbjct: 3   RAVGEQLPGCLSLKRVPAHLRFSNGYRTKAASN--PNLKAVEVPRQWYNLVADLPVKPPP 60

Query: 106 FLHPKTFEPVKPEDLAPLFPDELIKQEGTNERFID 2
            LHPKT+EP+KPEDL+ LFPDELIKQE + ER+I+
Sbjct: 61  PLHPKTYEPIKPEDLSHLFPDELIKQEASTERYIN 95


>ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/95 (56%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
 Frame = -3

Query: 283 QADGQRL-SCFAPKKRDCHLRFLSGPKASAISTYAADSRAIEVPRQWYNLITDLPVKPPP 107
           +A G++L  C + K+   HLRF +G +  A S    + +++EVPRQWYNL+ DLPVKPPP
Sbjct: 3   RAVGEQLPGCLSLKRVPAHLRFSNGYRTKAASN--PNLKSVEVPRQWYNLVADLPVKPPP 60

Query: 106 FLHPKTFEPVKPEDLAPLFPDELIKQEGTNERFID 2
            LHPKT+EP+KPEDL+ LFPDELIKQE + ER+I+
Sbjct: 61  PLHPKTYEPIKPEDLSHLFPDELIKQEASTERYIN 95


>ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|222870708|gb|EEF07839.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/75 (60%), Positives = 59/75 (78%)
 Frame = -3

Query: 226 RFLSGPKASAISTYAADSRAIEVPRQWYNLITDLPVKPPPFLHPKTFEPVKPEDLAPLFP 47
           R  +G +  A ++  AD +A+ +P QWYN++ DL VKPPP LHPKTFEPVKPEDL+PLFP
Sbjct: 1   RLSNGGRVRARASLNADLKAVGIPHQWYNVVADLSVKPPPPLHPKTFEPVKPEDLSPLFP 60

Query: 46  DELIKQEGTNERFID 2
           DELI+QE + ++FID
Sbjct: 61  DELIRQEASTDKFID 75


>ref|NP_198669.1| tryptophan synthase beta chain [Arabidopsis thaliana]
           gi|10176821|dbj|BAB10143.1| tryptophan synthase beta
           chain [Arabidopsis thaliana] gi|19699005|gb|AAL91238.1|
           tryptophan synthase beta chain [Arabidopsis thaliana]
           gi|23198094|gb|AAN15574.1| tryptophan synthase beta
           chain [Arabidopsis thaliana] gi|332006948|gb|AED94331.1|
           tryptophan synthase beta chain [Arabidopsis thaliana]
          Length = 506

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = -3

Query: 208 KASAISTYAADSRAIEVPRQWYNLITDLPVKPPPFLHPKTFEPVKPEDLAPLFPDELIKQ 29
           KA+  ST+  +   +E+P+QWYNL+ DL VKPPP LHPKTFEP+KPEDLA LFP+ELIKQ
Sbjct: 53  KAALRSTH--NKSVVEIPKQWYNLVADLSVKPPPPLHPKTFEPIKPEDLAHLFPNELIKQ 110

Query: 28  EGTNERFID 2
           E T ERFID
Sbjct: 111 EATQERFID 119


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