BLASTX nr result

ID: Scutellaria24_contig00032599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032599
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...    77   1e-12
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10

>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/94 (47%), Positives = 60/94 (63%)
 Frame = -1

Query: 282 SAAAKMLRNRQSEKASEPKISTNSRVNPNPNWRIRIKQSQLVSQASTVLLQRHSKFWAPL 103
           +A A+ML  R++   S  KIS          WR RI+Q+QLVS+ ST+LLQR++  W PL
Sbjct: 22  TARAQMLLFRKTYSTSTSKIS----------WRTRIQQNQLVSEISTILLQRNN--WIPL 69

Query: 102 LKPLKLTSIFTPSLFCQILHRIQNHPKICFDFFN 1
           L+ L L+S  TP LF QILH+ Q H +I  +FFN
Sbjct: 70  LQNLNLSSKLTPFLFFQILHKTQTHAQISLNFFN 103


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = -1

Query: 213 SRVNPNPN--WRIRIKQSQLVSQASTVLLQRHSKFWAPLLKPLKLTSIFTPSLFCQILHR 40
           +R NP  +  WRI+I+Q+QLV Q S++LLQRH+  W  LL+   L++  TP LF QILH+
Sbjct: 4   NRANPTTSMKWRIQIRQNQLVFQISSILLQRHN--WVSLLQNFNLSTKLTPPLFNQILHK 61

Query: 39  IQNHPKICFDFFN 1
            Q +P+I   FFN
Sbjct: 62  TQTNPQISLRFFN 74


>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = -1

Query: 192 NWRIRIKQSQLVSQASTVLLQRHSKFWAPLLKPLKLTSIFTPSLFCQILHRIQNHPKICF 13
           NWR +IKQ+QL+SQ S++LLQRH+  W  LL+   L+S  TPSLF QIL + Q +P+   
Sbjct: 21  NWRAQIKQNQLISQISSILLQRHN--WVTLLRNFNLSSKLTPSLFHQILLKTQKNPQSSL 78

Query: 12  DFFN 1
            FFN
Sbjct: 79  SFFN 82


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