BLASTX nr result

ID: Scutellaria24_contig00032476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032476
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu...    92   3e-17
ref|XP_003614775.1| DIS3-like exonuclease [Medicago truncatula] ...    92   6e-17
ref|XP_003614757.1| DIS3-like exonuclease [Medicago truncatula] ...    92   6e-17
ref|XP_002306619.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...    89   4e-16

>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
           gi|223546865|gb|EEF48362.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1099

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   IERSVRCDSIVGFLNVKQWIYSREXXXXXXXXXXHQPDLN-YGYVLLTPTDPRFTKMIVP 177
           IERS R D+I+GFLNVKQW Y RE          +   ++   Y+ L PTDP+F KM+V 
Sbjct: 340 IERSPRRDAIIGFLNVKQWFYCREACKKDSKKNKNSSSISDREYIQLMPTDPKFPKMMVL 399

Query: 178 LRNLPESIRERLEAGDKTIESDLVGAKVVDWAEDSDFPEA 297
             +LP+SI++RLE GD T+E +LV A++ +W ++S  P A
Sbjct: 400 ASSLPDSIKKRLEGGDATVEMELVAAQIDNWDDESPSPHA 439


>ref|XP_003614775.1| DIS3-like exonuclease [Medicago truncatula]
           gi|355516110|gb|AES97733.1| DIS3-like exonuclease
           [Medicago truncatula]
          Length = 1162

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/98 (46%), Positives = 65/98 (66%)
 Frame = +1

Query: 1   IERSVRCDSIVGFLNVKQWIYSREXXXXXXXXXXHQPDLNYGYVLLTPTDPRFTKMIVPL 180
           IERS R + IVG LNVKQW++S+E          +     + Y+ LTP DP+F  +++ +
Sbjct: 358 IERSPRRECIVGHLNVKQWVFSQEINKKDPRKNKNSVS-EHEYIQLTPIDPKFPNIMLLV 416

Query: 181 RNLPESIRERLEAGDKTIESDLVGAKVVDWAEDSDFPE 294
           R+LP+SI+ RL+ GD  IE DLV A++VDW E+S FPE
Sbjct: 417 RDLPKSIKIRLKNGDAAIEKDLVAAQIVDWFEESPFPE 454


>ref|XP_003614757.1| DIS3-like exonuclease [Medicago truncatula]
           gi|355516092|gb|AES97715.1| DIS3-like exonuclease
           [Medicago truncatula]
          Length = 1051

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/98 (46%), Positives = 65/98 (66%)
 Frame = +1

Query: 1   IERSVRCDSIVGFLNVKQWIYSREXXXXXXXXXXHQPDLNYGYVLLTPTDPRFTKMIVPL 180
           IERS R + IVG LNVKQW++S+E          +     + Y+ LTP DP+F  +++ +
Sbjct: 358 IERSPRRECIVGHLNVKQWVFSQEINKKDPRKNKNSVS-EHEYIQLTPIDPKFPNIMLLV 416

Query: 181 RNLPESIRERLEAGDKTIESDLVGAKVVDWAEDSDFPE 294
           R+LP+SI+ RL+ GD  IE DLV A++VDW E+S FPE
Sbjct: 417 RDLPKSIKIRLKNGDAAIEKDLVAAQIVDWFEESPFPE 454


>ref|XP_002306619.1| predicted protein [Populus trichocarpa] gi|222856068|gb|EEE93615.1|
           predicted protein [Populus trichocarpa]
          Length = 944

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   IERSVRCDSIVGFLNVKQWIYSREXXXXXXXXXXHQPDL-NYGYVLLTPTDPRFTKMIVP 177
           IE+S R D+I+GFLNVKQW Y +E            P + N  Y+ + P DPRF K++V 
Sbjct: 198 IEKSPRRDAIIGFLNVKQWFYYKEGCKKDAKKNKSLPSISNCEYIEIMPADPRFPKLMVL 257

Query: 178 LRNLPESIRERLEAGDKTIESDLVGAKVVDWAEDSDFPEA 297
           + +LP  I++RLE  D+T+E ++V A++  W+++S FPEA
Sbjct: 258 VSSLPNCIKKRLEDEDETVEMEMVAAQIDKWSDESPFPEA 297


>ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1133

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/99 (44%), Positives = 64/99 (64%)
 Frame = +1

Query: 1   IERSVRCDSIVGFLNVKQWIYSREXXXXXXXXXXHQPDLNYGYVLLTPTDPRFTKMIVPL 180
           +ERS R + IVG +NVKQW+  R+          +     + Y+ LTPTDP+F  M++ +
Sbjct: 375 MERSPRREGIVGHINVKQWVSFRDTGKKDLKKNKNLIS-EHEYIQLTPTDPKFPNMMLLV 433

Query: 181 RNLPESIRERLEAGDKTIESDLVGAKVVDWAEDSDFPEA 297
           R LP  I++R+++GD TIE DLV A++ DW E+S FPEA
Sbjct: 434 RKLPNCIKKRMKSGDVTIEMDLVAAQIDDWVEESPFPEA 472


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