BLASTX nr result

ID: Scutellaria24_contig00032425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032425
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...    77   4e-12
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...    73   7e-11
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...    70   3e-10
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-09
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...    67   4e-09

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
           protein product [Vitis vinifera]
          Length = 878

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 32/47 (68%), Positives = 39/47 (82%)
 Frame = +2

Query: 2   NDWQTILHRDDGSAIAMKTLKRVQKGWGHGNLSYSQAQKKDFLDDWD 142
           +DWQTI+HRDDGS +A+K LKRVQKGWG G++S  Q QK DFLD W+
Sbjct: 829 SDWQTIIHRDDGSGLALKALKRVQKGWGQGSISSLQPQKNDFLDYWE 875


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +2

Query: 2   NDWQTILHRDDGSAIAMKTLKRVQKGWGHGNLSYSQAQKKDFLDDWDSA 148
           NDW  I+HRDDGS IA+K LKRVQKGWG G++S  Q QK +F D WD +
Sbjct: 825 NDWPIIVHRDDGSGIALKALKRVQKGWGQGSISSLQPQKLEFFDYWDGS 873


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 874

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = +2

Query: 2   NDWQTILHRDDGSAIAMKTLKRVQKGWGHGNLSYSQAQKKDFLDDWD 142
           N+WQ ILHRDDGS IA+K+L RV+KGWG G++S  Q Q+ D+LD W+
Sbjct: 825 NNWQNILHRDDGSGIALKSLSRVKKGWGQGDISSFQPQRVDYLDYWE 871


>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = +2

Query: 2   NDWQTILHRDDGSAIAMKTLKRVQKGWGHGNLSYSQAQKKDFLDDWDSA 148
           +DWQ I++RD GS IA+KTLKRVQKGWG G++S  Q Q+ DFLD +D +
Sbjct: 826 SDWQDIINRDAGSGIALKTLKRVQKGWGQGSISSLQPQQNDFLDYYDGS 874


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330251496|gb|AEC06590.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 27/47 (57%), Positives = 37/47 (78%)
 Frame = +2

Query: 2   NDWQTILHRDDGSAIAMKTLKRVQKGWGHGNLSYSQAQKKDFLDDWD 142
           N+WQ ILHRDDGS IA+++L RV+KGWG G++S  Q  + D+LD W+
Sbjct: 825 NNWQNILHRDDGSGIALRSLSRVKKGWGQGDISSFQPPRVDYLDYWE 871


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