BLASTX nr result

ID: Scutellaria24_contig00032308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032308
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_003588687.1| Pentatricopeptide repeat-containing protein ...   114   8e-24

>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial [Vitis vinifera]
           gi|296081989|emb|CBI20994.3| unnamed protein product
           [Vitis vinifera]
          Length = 597

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/86 (66%), Positives = 69/86 (80%)
 Frame = +3

Query: 3   TMYTYNSLVKGFCKTGDLVGASKILKMMMDDKFSPTATTYCYFFKYFLKVGKTEVALKLY 182
           T+ TYNSLVKGFCK GDLVGASK+LKMM+   F PT TTY YFF+YF + GKTE  + LY
Sbjct: 355 TISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLY 414

Query: 183 NHMIKCGYEPDRLTYHLLVKMLCKEK 260
             MI+ G+ PDRLTYHLL+KM+C+E+
Sbjct: 415 TKMIESGHTPDRLTYHLLIKMMCEEE 440


>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
           gi|449503560|ref|XP_004162063.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
          Length = 615

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/86 (66%), Positives = 70/86 (81%)
 Frame = +3

Query: 3   TMYTYNSLVKGFCKTGDLVGASKILKMMMDDKFSPTATTYCYFFKYFLKVGKTEVALKLY 182
           T+ TYNSLVKG+CK GDL GASKILKMM+   F+PT TTY YFF++F K GK E ++ LY
Sbjct: 371 TISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLY 430

Query: 183 NHMIKCGYEPDRLTYHLLVKMLCKEK 260
           N MI+ GY PD+LTYHLL+KMLC+E+
Sbjct: 431 NKMIESGYAPDKLTYHLLLKMLCEEE 456


>ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Glycine max]
          Length = 622

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/83 (68%), Positives = 66/83 (79%)
 Frame = +3

Query: 12  TYNSLVKGFCKTGDLVGASKILKMMMDDKFSPTATTYCYFFKYFLKVGKTEVALKLYNHM 191
           TYNSLVKGFCK GDLVGASKILKMM+   F P+ATTY YFF+YF +  K E  + LY  +
Sbjct: 383 TYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTKL 442

Query: 192 IKCGYEPDRLTYHLLVKMLCKEK 260
           I+ GY PDRLTYHLLVKMLC+E+
Sbjct: 443 IQSGYTPDRLTYHLLVKMLCEEE 465


>ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|222854612|gb|EEE92159.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/86 (65%), Positives = 67/86 (77%)
 Frame = +3

Query: 3   TMYTYNSLVKGFCKTGDLVGASKILKMMMDDKFSPTATTYCYFFKYFLKVGKTEVALKLY 182
           T+ TYNSLVKG+CK GDLVGASKILKMM+  +  PT TTY YFF++F K  K E  + LY
Sbjct: 365 TISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEEGMNLY 424

Query: 183 NHMIKCGYEPDRLTYHLLVKMLCKEK 260
             MI+ GY PDRLTYHLL+KMLC+E+
Sbjct: 425 TKMIESGYTPDRLTYHLLLKMLCEEE 450


>ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477735|gb|AES58938.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 587

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/86 (60%), Positives = 65/86 (75%)
 Frame = +3

Query: 3   TMYTYNSLVKGFCKTGDLVGASKILKMMMDDKFSPTATTYCYFFKYFLKVGKTEVALKLY 182
           T+ TYNSLVKGFCK GD+ GASKILK M+   F P  TTY YFF+YF + GK +  + LY
Sbjct: 358 TLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLY 417

Query: 183 NHMIKCGYEPDRLTYHLLVKMLCKEK 260
             MI+ G+ PDRLTYHL++KMLC+E+
Sbjct: 418 TKMIESGHNPDRLTYHLVLKMLCEEE 443


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