BLASTX nr result

ID: Scutellaria24_contig00032273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032273
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin...   137   9e-31
ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containin...   137   9e-31
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ...   136   2e-30
ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containin...   134   8e-30
emb|CBI34878.3| unnamed protein product [Vitis vinifera]              128   4e-28

>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Vitis vinifera]
          Length = 948

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/113 (53%), Positives = 83/113 (73%)
 Frame = -1

Query: 343 LDREFPSRFDKRRSNQTSVSKAPLELHQRIRGNQMFSGEVGPMRGRGREPMPWGIRDSRF 164
           ++++F  +F+KRR    + ++APL+L+QR R NQ FSG+ GP+RGRGR+P  W  RD RF
Sbjct: 94  MEKDFSGKFEKRRPGLATFARAPLDLNQRTRMNQSFSGDSGPVRGRGRDPGSWNQRDPRF 153

Query: 163 GLVDVASQIVQPGPVPSMFAGRGLANVANAHGTSWNAFGMVPGIPNGGLDSLH 5
             VD+ASQ+VQ    P ++AGRGL NV+N    SW+ FG++PGIPNG LDSLH
Sbjct: 154 SQVDIASQMVQGSIPPGLYAGRGLPNVSNTQNASWSGFGLLPGIPNGALDSLH 206


>ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Glycine max]
          Length = 945

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/114 (56%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
 Frame = -1

Query: 340 DREFPSRFDKRRSNQTSVSKAPLELHQRIRGNQMFSGEVGPMRGRGREPMPWGIRDSRFG 161
           D+EF  +FD+RR    S  +APL++ QR+R NQ F+G+ G  RGRGRE   W  R+SRFG
Sbjct: 95  DKEFYFKFDRRRPGLASAPRAPLDMSQRLRANQSFTGDPGIGRGRGRESGFWNQRESRFG 154

Query: 160 LVDVASQIVQPGPV-PSMFAGRGLANVANAHGTSWNAFGMVPGIPNGGLDSLHP 2
            +DVASQ+V  G + PS++AGRGL NV+NA   SWN FG++P +PNGGLD LHP
Sbjct: 155 SMDVASQVVPQGSIPPSLYAGRGLLNVSNAQNASWNTFGLIPAVPNGGLDMLHP 208


>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
           gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
           [Ricinus communis]
          Length = 972

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/115 (56%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
 Frame = -1

Query: 343 LDREFPSRFDKRRSNQTSVSKAPLELHQRIRGNQMFSGEVGPMRGRGREPMPWGIRDSRF 164
           L+++F  +FDKRR    S  +  ++L+QRIR NQ+F GE GP RGRGR+   W  RDSRF
Sbjct: 94  LEKDF-IKFDKRRPGMASFPRMNVDLNQRIRSNQIFFGEPGPGRGRGRDSGSWNQRDSRF 152

Query: 163 GLVDVASQIVQPGPV-PSMFAGRGLANVANAHGTSWNAFGMVPGIPNGGLDSLHP 2
             VD+ASQ+VQ G + P +FAGRGL NV+N   +SWN FG++PGIP+GGLD+LHP
Sbjct: 153 SSVDIASQMVQQGSITPGLFAGRGLPNVSNTQNSSWNTFGLIPGIPSGGLDTLHP 207


>ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Glycine max]
          Length = 922

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/114 (54%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
 Frame = -1

Query: 340 DREFPSRFDKRRSNQTSVSKAPLELHQRIRGNQMFSGEVGPMRGRGREPMPWGIRDSRFG 161
           D+EF  +FD+RR    S  + PL++ QR+R NQ F+G+ G  RGRGRE   W  R+SRFG
Sbjct: 95  DKEFYFKFDRRRPGLASAPRTPLDMSQRLRANQSFTGDPGVGRGRGRESGFWNQRESRFG 154

Query: 160 LVDVASQIVQPGPV-PSMFAGRGLANVANAHGTSWNAFGMVPGIPNGGLDSLHP 2
            +DVASQ+V  G + PS++AGRGL NV+NA   +WN FG++P +PNGGLD LHP
Sbjct: 155 SMDVASQMVPQGSIPPSLYAGRGLPNVSNAQNAAWNTFGLIPAVPNGGLDMLHP 208


>emb|CBI34878.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/105 (56%), Positives = 76/105 (72%)
 Frame = -1

Query: 319 FDKRRSNQTSVSKAPLELHQRIRGNQMFSGEVGPMRGRGREPMPWGIRDSRFGLVDVASQ 140
           F +  S  T+ ++APL+L+QR R NQ FSG+ GP+RGRGR+P  W  RD RF  VD+ASQ
Sbjct: 75  FRENDSQSTTFARAPLDLNQRTRMNQSFSGDSGPVRGRGRDPGSWNQRDPRFSQVDIASQ 134

Query: 139 IVQPGPVPSMFAGRGLANVANAHGTSWNAFGMVPGIPNGGLDSLH 5
           +VQ    P ++AGRGL NV+N    SW+ FG++PGIPNG LDSLH
Sbjct: 135 MVQGSIPPGLYAGRGLPNVSNTQNASWSGFGLLPGIPNGALDSLH 179


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