BLASTX nr result

ID: Scutellaria24_contig00032180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032180
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arab...   113   7e-30
ref|XP_002888392.1| NADH dehydrogenase ND2 [Arabidopsis lyrata s...    81   1e-13

>ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arabidopsis lyrata subsp.
           lyrata] gi|297309058|gb|EFH39483.1| hypothetical protein
           ARALYDRAFT_497141 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  113 bits (282), Expect(2) = 7e-30
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = -2

Query: 376 YFSSFRDYECNRSIRRQKDHPKMIISWLLRTN*IRWFYFSIFLTCSYGTKVEKIEK 209
           +FSSFRDYECNRSIRRQKDHPKMIISWLLRTN IRWF+FSIF TCSYGTKVEKIEK
Sbjct: 139 WFSSFRDYECNRSIRRQKDHPKMIISWLLRTNQIRWFHFSIFRTCSYGTKVEKIEK 194



 Score = 42.4 bits (98), Expect(2) = 7e-30
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -1

Query: 212 KNQSFTTTDEGFLEKLRISNLFLEI 138
           KNQSFTTTDEGFLEKLRI   FL +
Sbjct: 194 KNQSFTTTDEGFLEKLRIIVAFLSV 218


>ref|XP_002888392.1| NADH dehydrogenase ND2 [Arabidopsis lyrata subsp. lyrata]
           gi|297334233|gb|EFH64651.1| NADH dehydrogenase ND2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 425

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = -2

Query: 373 FSSFRDYECNRSIRRQKDHPKMIISWLLRTN*IRWFYFSIFLT 245
           +   RDYECNRSIRRQKDHPKMIISWLLRTN IRWF+FSIF T
Sbjct: 134 YEGVRDYECNRSIRRQKDHPKMIISWLLRTNQIRWFHFSIFRT 176


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