BLASTX nr result

ID: Scutellaria24_contig00032174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032174
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241...    66   3e-09
emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]    66   3e-09
ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinu...    65   7e-09
ref|XP_003520171.1| PREDICTED: uncharacterized protein LOC100808...    59   3e-07
ref|XP_003608039.1| La-related protein [Medicago truncatula] gi|...    59   4e-07

>ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241743 [Vitis vinifera]
           gi|297741333|emb|CBI32464.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
 Frame = +3

Query: 6   KRSWSKNRGKAKQRPQLQSTRSL--PTQSSHLTNSCPG---QPIKGPRMPDGTRGFTMGR 170
           K+ W++ RGK + R Q+ S R L  P+  S  +N       Q  KGPRMPDGTRGFTMGR
Sbjct: 338 KKGWARGRGKPRGRTQITSGRGLLAPSPQSSGSNQFEASAKQITKGPRMPDGTRGFTMGR 397

Query: 171 GKPLAIPVHSS 203
           GKP++ P  +S
Sbjct: 398 GKPISTPALAS 408


>emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]
          Length = 941

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
 Frame = +3

Query: 6   KRSWSKNRGKAKQRPQLQSTRSL--PTQSSHLTNSCPG---QPIKGPRMPDGTRGFTMGR 170
           K+ W++ RGK + R Q+ S R L  P+  S  +N       Q  KGPRMPDGTRGFTMGR
Sbjct: 322 KKGWARGRGKPRGRTQITSGRGLLAPSPQSSGSNQFEASAKQITKGPRMPDGTRGFTMGR 381

Query: 171 GKPLAIPVHSS 203
           GKP++ P  +S
Sbjct: 382 GKPISTPALAS 392


>ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223538880|gb|EEF40478.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 440

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
 Frame = +3

Query: 6   KRSWSKNRGKAKQRPQLQSTRSL--PTQSSHLTNSCPGQP---IKGPRMPDGTRGFTMGR 170
           K+ W+K RGK + R Q    R L  P+  S  +  C        KGPRMPDGTRGFTMGR
Sbjct: 366 KKGWAKGRGKGRGRGQSHGGRGLLAPSPQSVSSPQCEASAKHTSKGPRMPDGTRGFTMGR 425

Query: 171 GKPLAIPVHSS 203
           GKPL  P  +S
Sbjct: 426 GKPLGTPTLAS 436


>ref|XP_003520171.1| PREDICTED: uncharacterized protein LOC100808205 [Glycine max]
          Length = 404

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
 Frame = +3

Query: 6   KRSWS-KNRGKAKQRPQLQSTRSLPTQSSH--LTNSCPGQPIKGPRMPDGTRGFTMGRGK 176
           K+ W+ + RGK + R Q +   + P+QSS   L ++      KGPRMPDGTRGFTMGRGK
Sbjct: 332 KKGWAGRGRGKGRGRTQGRGLLAPPSQSSSTILCDAHTKHNTKGPRMPDGTRGFTMGRGK 391

Query: 177 PLAIPVH 197
           P++   H
Sbjct: 392 PMSPSSH 398


>ref|XP_003608039.1| La-related protein [Medicago truncatula]
           gi|355509094|gb|AES90236.1| La-related protein [Medicago
           truncatula]
          Length = 442

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
 Frame = +3

Query: 6   KRSWSKNRGKAKQRPQLQSTRSL-----PTQSSHLTNSCPGQPIKGPRMPDGTRGFTMGR 170
           K+ W++ RGK + R Q  + R L     P+ S  L         KGPRMPDGTRGF +GR
Sbjct: 371 KKGWTRGRGKGRGRTQNHTGRGLLAPPSPSSSVVLGEVSTKPNAKGPRMPDGTRGFAIGR 430

Query: 171 GKPLAIP 191
           GKP++ P
Sbjct: 431 GKPISSP 437


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