BLASTX nr result

ID: Scutellaria24_contig00032127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00032127
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22661.3| unnamed protein product [Vitis vinifera]               58   3e-11
ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine l...    58   3e-11

>emb|CBI22661.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score = 58.2 bits (139), Expect(2) = 3e-11
 Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = +3

Query: 21  GAFSLLNHPIEVSDAPNN---VECIPAQSCSNRYKVTTFGLSSYNDWHALSVSPNSHGGC 191
           GA SLL+   E + A ++   +  + +  CS+ Y++TTFG+S  N+WHALS+ PNS GG 
Sbjct: 273 GACSLLDDTEESTVADHSSGKLSTLNSDKCSDGYRITTFGISRTNEWHALSIRPNSQGGS 332

Query: 192 DYQLSY 209
           D+ L +
Sbjct: 333 DFVLCH 338



 Score = 34.7 bits (78), Expect(2) = 3e-11
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 217 SGFAQCHRGQPVCDISLKIPGGH 285
           S F  CHRG PV +I+L+IPG H
Sbjct: 332 SDFVLCHRGYPVANITLQIPGVH 354


>ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine ligase-like [Vitis
           vinifera]
          Length = 541

 Score = 58.2 bits (139), Expect(2) = 3e-11
 Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = +3

Query: 21  GAFSLLNHPIEVSDAPNN---VECIPAQSCSNRYKVTTFGLSSYNDWHALSVSPNSHGGC 191
           GA SLL+   E + A ++   +  + +  CS+ Y++TTFG+S  N+WHALS+ PNS GG 
Sbjct: 246 GACSLLDDTEESTVADHSSGKLSTLNSDKCSDGYRITTFGISRTNEWHALSIRPNSQGGS 305

Query: 192 DYQLSY 209
           D+ L +
Sbjct: 306 DFVLCH 311



 Score = 34.7 bits (78), Expect(2) = 3e-11
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 217 SGFAQCHRGQPVCDISLKIPGGH 285
           S F  CHRG PV +I+L+IPG H
Sbjct: 305 SDFVLCHRGYPVANITLQIPGVH 327


Top