BLASTX nr result

ID: Scutellaria24_contig00031806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031806
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containi...   131   7e-29
ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]   129   3e-28
ref|XP_002298341.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002520533.1| pentatricopeptide repeat-containing protein,...   125   4e-27

>ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Cucumis sativus]
           gi|449496662|ref|XP_004160192.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g59600-like [Cucumis sativus]
          Length = 547

 Score =  131 bits (329), Expect = 7e-29
 Identities = 60/105 (57%), Positives = 81/105 (77%)
 Frame = -2

Query: 315 WNSLIAGFSQANDEMMIRKIFKIMETNGLKPDVVSWTSVISGLVHNCRSREAYSAFRVMI 136
           WN+L+ GFSQ  +E M+R++FK ME NG++PDVVSWTSVISG V N R+ EA+  FR M+
Sbjct: 233 WNTLVTGFSQIGEEEMVRELFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRML 292

Query: 135 QSGVFPTASTISGLLPASASFADLRRGKEVHGYSVVMGFEEDVFV 1
            +G  PT++TIS LLPA AS  + R GKE+HG+S+ +G E+DV+V
Sbjct: 293 NAGFHPTSATISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYV 337


>ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Vitis vinifera]
          Length = 545

 Score =  129 bits (323), Expect = 3e-28
 Identities = 57/105 (54%), Positives = 80/105 (76%)
 Frame = -2

Query: 315 WNSLIAGFSQANDEMMIRKIFKIMETNGLKPDVVSWTSVISGLVHNCRSREAYSAFRVMI 136
           WN+LIAGFSQ  D+ M+ ++F++M  NG++PDVVSWTSVISG V N  + E + AF+ M+
Sbjct: 232 WNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEML 291

Query: 135 QSGVFPTASTISGLLPASASFADLRRGKEVHGYSVVMGFEEDVFV 1
             G  P++ TIS LLPA  + A+LR GKE+HGY++V+G E+DV+V
Sbjct: 292 DQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYV 336


>emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  129 bits (323), Expect = 3e-28
 Identities = 57/105 (54%), Positives = 80/105 (76%)
 Frame = -2

Query: 315  WNSLIAGFSQANDEMMIRKIFKIMETNGLKPDVVSWTSVISGLVHNCRSREAYSAFRVMI 136
            WN+LIAGFSQ  D+ M+ ++F++M  NG++PDVVSWTSVISG V N  + E + AF+ M+
Sbjct: 1008 WNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEML 1067

Query: 135  QSGVFPTASTISGLLPASASFADLRRGKEVHGYSVVMGFEEDVFV 1
              G  P++ TIS LLPA  + A+LR GKE+HGY++V+G E+DV+V
Sbjct: 1068 DQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYV 1112


>ref|XP_002298341.1| predicted protein [Populus trichocarpa] gi|222845599|gb|EEE83146.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  127 bits (318), Expect = 1e-27
 Identities = 56/105 (53%), Positives = 84/105 (80%)
 Frame = -2

Query: 315 WNSLIAGFSQANDEMMIRKIFKIMETNGLKPDVVSWTSVISGLVHNCRSREAYSAFRVMI 136
           WNSLI+GF+Q  D+ M+ K+F++M +NG++PDV+SWTSVISGLV N R+  A+ AF+ M+
Sbjct: 114 WNSLISGFAQKGDDAMVSKMFELMISNGVEPDVISWTSVISGLVQNFRNEAAFDAFKQML 173

Query: 135 QSGVFPTASTISGLLPASASFADLRRGKEVHGYSVVMGFEEDVFV 1
             G  PT++TIS +L A A+ A++RRG+E+HGY+VV+  E+D++V
Sbjct: 174 GRGFLPTSATISTVLAACATMANVRRGREIHGYAVVIRVEDDIYV 218


>ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540375|gb|EEF41946.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 547

 Score =  125 bits (314), Expect = 4e-27
 Identities = 53/105 (50%), Positives = 82/105 (78%)
 Frame = -2

Query: 315 WNSLIAGFSQANDEMMIRKIFKIMETNGLKPDVVSWTSVISGLVHNCRSREAYSAFRVMI 136
           WN+LI+GF+QA D++M++++F +M  +G +PDV+SWTSVIS  V N  +  A++AF+ M+
Sbjct: 234 WNTLISGFAQAGDKVMVQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQML 293

Query: 135 QSGVFPTASTISGLLPASASFADLRRGKEVHGYSVVMGFEEDVFV 1
           Q G +P ++TIS LLPA AS A++R G+E+HGY+  +G EED++V
Sbjct: 294 QHGAYPNSATISSLLPACASLANVRHGRELHGYAFAIGVEEDIYV 338


Top