BLASTX nr result

ID: Scutellaria24_contig00031779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031779
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EKC22127.1| hypothetical protein CGI_10002749 [Crassostrea gi...    62   5e-08
ref|NP_176239.1| RING/U-box domain-containing protein [Arabidops...    62   6e-08
ref|XP_002891232.1| zinc finger family protein [Arabidopsis lyra...    62   6e-08
ref|XP_002172844.1| zinc finger protein [Schizosaccharomyces jap...    61   8e-08
ref|XP_003529105.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   1e-07

>gb|EKC22127.1| hypothetical protein CGI_10002749 [Crassostrea gigas]
          Length = 289

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/61 (45%), Positives = 37/61 (60%)
 Frame = +1

Query: 202 PASKSVVDSLPIKSFPPNSTPSLLSCLICMEDFEVNSGSSVTINELPCAHYFHKDCIVEW 381
           PA KS +DSLP          ++L C ICMEDFE++      + +LPC H++HK CIV W
Sbjct: 191 PAEKSKIDSLPNVKVTQPQVDNILQCSICMEDFELHE----NVKKLPCEHHYHKVCIVTW 246

Query: 382 L 384
           L
Sbjct: 247 L 247


>ref|NP_176239.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|3249088|gb|AAC24072.1| Contains similarity to goliath
           protein gb|M97204 from D. melanogster [Arabidopsis
           thaliana] gi|332195557|gb|AEE33678.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 327

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = +1

Query: 202 PASKSVVDSLP-IKSFPPNSTPSLLSCLICMEDFEVNSGSSVTINELPCAHYFHKDCIVE 378
           PAS+  ++SLP +K  P + T  +  C +CME+F V   ++    ELPC H +HKDCIV 
Sbjct: 198 PASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDAT----ELPCKHIYHKDCIVP 253

Query: 379 WLR 387
           WLR
Sbjct: 254 WLR 256


>ref|XP_002891232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337074|gb|EFH67491.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 326

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = +1

Query: 202 PASKSVVDSLP-IKSFPPNSTPSLLSCLICMEDFEVNSGSSVTINELPCAHYFHKDCIVE 378
           PAS+  +++LP +K  P + T  L  C +CME+F V   ++    ELPC H +HKDCI+ 
Sbjct: 197 PASEPTIEALPSVKITPQHLTNDLTQCTVCMEEFIVGGDAT----ELPCKHIYHKDCIIP 252

Query: 379 WLR 387
           WLR
Sbjct: 253 WLR 255


>ref|XP_002172844.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
           gi|212000891|gb|EEB06551.1| zinc finger protein
           [Schizosaccharomyces japonicus yFS275]
          Length = 492

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/66 (40%), Positives = 38/66 (57%)
 Frame = +1

Query: 190 HPSTPASKSVVDSLPIKSFPPNSTPSLLSCLICMEDFEVNSGSSVTINELPCAHYFHKDC 369
           H   PA +SV++ LP++  P N       C +C+E+F+  +G  V    LPC HYFH+ C
Sbjct: 336 HAPPPAPESVIEQLPVEKVPQNLVDEEYECTVCLENFK--TGDDVV--RLPCKHYFHEQC 391

Query: 370 IVEWLR 387
           I  WLR
Sbjct: 392 IKPWLR 397


>ref|XP_003529105.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 307

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/64 (39%), Positives = 39/64 (60%)
 Frame = +1

Query: 193 PSTPASKSVVDSLPIKSFPPNSTPSLLSCLICMEDFEVNSGSSVTINELPCAHYFHKDCI 372
           P T ASK+ ++S+P+     + T +   C +CME+FE+N  +     E+PC H +H +CI
Sbjct: 130 PPTAASKAAIESMPVVKILASHTYAESHCAVCMENFEINCDA----REMPCGHVYHSECI 185

Query: 373 VEWL 384
           V WL
Sbjct: 186 VPWL 189


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