BLASTX nr result

ID: Scutellaria24_contig00031776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031776
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    65   6e-09
ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_003603587.1| Pentatricopeptide repeat-containing protein ...    64   1e-08

>ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/79 (44%), Positives = 49/79 (62%)
 Frame = -2

Query: 327 IELLKEQGGTSVLLSNMYANENEWSKVVQIRKEMRGRMQDKPPGRSWIQIKDAIFEFIAR 148
           + L  E G T VLLSN+YA   +W KV +IR+ MRG M DK PG SWI+ K+ I  F + 
Sbjct: 615 LRLKAEDGPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKYPGLSWIEAKNDIHVFSSG 674

Query: 147 NEVDPLAMELHMVLEGIEK 91
           ++  P A E+H  L  +++
Sbjct: 675 DQSHPKADEVHAELHRLKR 693


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -2

Query: 348 GKAVLAKI-ELLKEQGGTSVLLSNMYANENEWSKVVQIRKEMRGRMQDKPPGRSWIQIKD 172
           GK V  K+ E+     G  VLLSNMYA    W  VV++RK+MR R   K PG SWI+I+ 
Sbjct: 579 GKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQS 638

Query: 171 AIFEFIARNEVDPLAMELHMVLE 103
            +  F+ +++  PL  ++H+VL+
Sbjct: 639 RVHVFMVKDKRHPLKKDIHLVLK 661


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 26/79 (32%), Positives = 49/79 (62%)
 Frame = -2

Query: 327 IELLKEQGGTSVLLSNMYANENEWSKVVQIRKEMRGRMQDKPPGRSWIQIKDAIFEFIAR 148
           + L  E+ GT +LL+N+YA+   W  V ++R+ M+  +  K PG SWI++KD ++ FI  
Sbjct: 687 LTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVG 746

Query: 147 NEVDPLAMELHMVLEGIEK 91
           +   P + E+++ L+ + +
Sbjct: 747 DRSHPRSKEIYVKLDDLRE 765


>ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/80 (40%), Positives = 50/80 (62%)
 Frame = -2

Query: 327 IELLKEQGGTSVLLSNMYANENEWSKVVQIRKEMRGRMQDKPPGRSWIQIKDAIFEFIAR 148
           +EL+ +Q GT + LSNMYA   +W +V ++RK MR R   K PG SWI++++ +  F+  
Sbjct: 606 LELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVD 665

Query: 147 NEVDPLAMELHMVLEGIEKL 88
           + V P   E+H V   +E+L
Sbjct: 666 DAVHP---EVHAVYRYLEQL 682


>ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492635|gb|AES73838.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 568

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/82 (37%), Positives = 49/82 (59%)
 Frame = -2

Query: 342 AVLAKIELLKEQGGTSVLLSNMYANENEWSKVVQIRKEMRGRMQDKPPGRSWIQIKDAIF 163
           AV   +EL  E+ G  VLL+NMYA   +W  V  IRK +R +   K PG S I++ + + 
Sbjct: 434 AVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQ 493

Query: 162 EFIARNEVDPLAMELHMVLEGI 97
           EF++ ++  P + E+  +LEG+
Sbjct: 494 EFVSSDDSKPFSQEVFWILEGL 515


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