BLASTX nr result

ID: Scutellaria24_contig00031752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031752
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ...   179   2e-43
ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ri...   179   2e-43
emb|CBI33509.3| unnamed protein product [Vitis vinifera]              178   4e-43
ref|XP_003616296.1| DNA repair protein complementing XP-C cells-...   172   2e-41

>ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|222848838|gb|EEE86385.1|
           predicted protein [Populus trichocarpa]
          Length = 868

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/135 (66%), Positives = 110/135 (81%)
 Frame = +3

Query: 3   PLYWAEVFCGGENLTGKWVHIDAVNAIIDGEHKVEAAATACRKSLRYVVAFAGKGAKDVT 182
           PLYWAEV+C GENLTGKWVH+DAV+ I+DGE KVEAAA AC+ SLRYVVAFAG GAKDVT
Sbjct: 409 PLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSLRYVVAFAGLGAKDVT 468

Query: 183 RRYCMKWYKVAAQRVNSTWWDEVLAPLKELESVATAGVVNLECEASGHKIEASHECCEKK 362
           RRYCMKWYK+A+QRVNS WWD VLAPL+ELES AT G+ +LE   +    +AS+E   + 
Sbjct: 469 RRYCMKWYKIASQRVNSLWWDAVLAPLRELESGATGGMAHLEKPHA----DASNE--HEN 522

Query: 363 ALKSPMNSFSSTRSS 407
            + S +NSF++TR++
Sbjct: 523 VIASGLNSFAATRNT 537


>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
            vinifera]
          Length = 1103

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/136 (66%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3    PLYWAEVFCGGENLTGKWVHIDAVNAIIDGEHKVEAAATACRKSLRYVVAFAGKGAKDVT 182
            PLYWAEVFC GENLTGKWVHIDA+NAIIDGE KVEAAA AC+ SLRYVVAF+G GAKDVT
Sbjct: 644  PLYWAEVFCTGENLTGKWVHIDAINAIIDGEEKVEAAAAACKTSLRYVVAFSGNGAKDVT 703

Query: 183  RRYCMKWYKVAAQRVNSTWWDEVLAPLKELESVATAGVVNLECEASGHKIEASHECCEK- 359
            RRYCMKWY++A+QR+NS WWD VLAPLKELE+ A  GV            E   E  +K 
Sbjct: 704  RRYCMKWYRIASQRINSAWWDAVLAPLKELEAGAVGGV------------EVLKENVKKV 751

Query: 360  KALKSPMNSFSSTRSS 407
            +A  S  N+F +TR S
Sbjct: 752  RAESSDRNAFVATRDS 767


>ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ricinus communis]
           gi|223528425|gb|EEF30459.1| DNA repair protein xp-C /
           rad4, putative [Ricinus communis]
          Length = 683

 Score =  179 bits (454), Expect = 2e-43
 Identities = 90/135 (66%), Positives = 100/135 (74%)
 Frame = +3

Query: 3   PLYWAEVFCGGENLTGKWVHIDAVNAIIDGEHKVEAAATACRKSLRYVVAFAGKGAKDVT 182
           PLYWAEV+C GENLTGKWVHIDAVNAI+DGE KVEA+A AC+ SLRYVVAFAG GAKDVT
Sbjct: 335 PLYWAEVYCSGENLTGKWVHIDAVNAIVDGEQKVEASAAACKTSLRYVVAFAGHGAKDVT 394

Query: 183 RRYCMKWYKVAAQRVNSTWWDEVLAPLKELESVATAGVVNLECEASGHKIEASHECCEKK 362
           RRYCMKWYK+A+QR+NS WWD VLAPL+ELES AT G      E    K +         
Sbjct: 395 RRYCMKWYKIASQRINSIWWDAVLAPLRELESGATGGP-----EVPERKTDIE------- 442

Query: 363 ALKSPMNSFSSTRSS 407
              S  NSF STR+S
Sbjct: 443 --SSGRNSFVSTRTS 455


>emb|CBI33509.3| unnamed protein product [Vitis vinifera]
          Length = 866

 Score =  178 bits (452), Expect = 4e-43
 Identities = 91/137 (66%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
 Frame = +3

Query: 3   PLYWAEVFCGGENLTGKWVHIDAVNAIIDGEHKVEAAATACRKSLRYVVAFAGKGAKDVT 182
           PLYWAEVFC GENLTGKWVHIDA+NAIIDGE KVEAAA AC+ SLRYVVAF+G GAKDVT
Sbjct: 398 PLYWAEVFCTGENLTGKWVHIDAINAIIDGEEKVEAAAAACKTSLRYVVAFSGNGAKDVT 457

Query: 183 RRYCMKWYKVAAQRVNSTWWDEVLAPLKELESVATAGVVNLECEASGH-KIEASHECCEK 359
           RRYCMKWY++A+QR+NS WWD VLAPLKELE    AG V       G   +E   E  +K
Sbjct: 458 RRYCMKWYRIASQRINSAWWDAVLAPLKELE----AGAVGDHVTCPGKLGVEVLKENVKK 513

Query: 360 -KALKSPMNSFSSTRSS 407
            +A  S  N+F +TR S
Sbjct: 514 VRAESSDRNAFVATRDS 530


>ref|XP_003616296.1| DNA repair protein complementing XP-C cells-like protein [Medicago
           truncatula] gi|355517631|gb|AES99254.1| DNA repair
           protein complementing XP-C cells-like protein [Medicago
           truncatula]
          Length = 1052

 Score =  172 bits (437), Expect = 2e-41
 Identities = 79/100 (79%), Positives = 87/100 (87%)
 Frame = +3

Query: 3   PLYWAEVFCGGENLTGKWVHIDAVNAIIDGEHKVEAAATACRKSLRYVVAFAGKGAKDVT 182
           PLYWAEV+C  ENLTGKWVH+DAVN IIDGE KVEA   AC+ SLRYVVAFAG GAKDVT
Sbjct: 591 PLYWAEVYCSEENLTGKWVHMDAVNLIIDGEDKVEAMVAACKTSLRYVVAFAGHGAKDVT 650

Query: 183 RRYCMKWYKVAAQRVNSTWWDEVLAPLKELESVATAGVVN 302
           RRYCMKWYK+A+QRVNSTWW+ VLAPL+ LES AT GVV+
Sbjct: 651 RRYCMKWYKIASQRVNSTWWESVLAPLRNLESGATGGVVH 690


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