BLASTX nr result

ID: Scutellaria24_contig00031740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031740
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   100   1e-19
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-16
emb|CBI31329.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15

>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/121 (45%), Positives = 69/121 (57%)
 Frame = +2

Query: 2   SLKDFASRGHLSKAFRTFSLIQGHALAXXXXXXXXXXXXXXXXXXXXXXXXREGKQLHAQ 181
           SLK FAS+G+L KAF+TFSLIQ HA                           +GKQLH  
Sbjct: 59  SLKGFASQGNLLKAFKTFSLIQRHASCSTSDDVVLHSVSSLLLSCVNLKSLSQGKQLHTL 118

Query: 182 IITWGHHANRALVPKLVSYYTSFDFLDDAQFIVANTYILSSLPWNILVSSYVNKGCFEEA 361
           II+ G   +  +VPKLV++YT+FD L DA  I  N+ IL  LPWN+L+SSYV  G   EA
Sbjct: 119 IISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVRNGLHGEA 178

Query: 362 I 364
           +
Sbjct: 179 L 179


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 54/121 (44%), Positives = 69/121 (57%)
 Frame = +2

Query: 2   SLKDFASRGHLSKAFRTFSLIQGHALAXXXXXXXXXXXXXXXXXXXXXXXXREGKQLHAQ 181
           SLKD A +GHL KAF TFSLI+ HA +                         +GKQLHA 
Sbjct: 8   SLKDLARKGHLLKAFETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLP-QGKQLHAH 66

Query: 182 IITWGHHANRALVPKLVSYYTSFDFLDDAQFIVANTYILSSLPWNILVSSYVNKGCFEEA 361
            I+ G   +  LVPKLV++Y+SF  L DA  I  N+ I++ LPWN+L+SSYVN G   EA
Sbjct: 67  TISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEA 126

Query: 362 I 364
           +
Sbjct: 127 L 127


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/121 (40%), Positives = 68/121 (56%)
 Frame = +2

Query: 2   SLKDFASRGHLSKAFRTFSLIQGHALAXXXXXXXXXXXXXXXXXXXXXXXXREGKQLHAQ 181
           SLKDF + GHL+ AF+TF  IQ HA +                         +GKQLHAQ
Sbjct: 50  SLKDFVTHGHLTNAFKTFFQIQHHAASSHLLLHPIGSLLLACTHFKSLS---QGKQLHAQ 106

Query: 182 IITWGHHANRALVPKLVSYYTSFDFLDDAQFIVANTYILSSLPWNILVSSYVNKGCFEEA 361
           +I+ G   N  LV +LV++YT+ + L DAQF+  ++  L  L WN+L+S+YV  G F EA
Sbjct: 107 VISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISAYVRNGFFVEA 166

Query: 362 I 364
           +
Sbjct: 167 L 167


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/121 (40%), Positives = 68/121 (56%)
 Frame = +2

Query: 2   SLKDFASRGHLSKAFRTFSLIQGHALAXXXXXXXXXXXXXXXXXXXXXXXXREGKQLHAQ 181
           SLK+F SRG+L  AF+T SLI+ HA +                         EG+QLH  
Sbjct: 67  SLKEFTSRGNLLDAFKTVSLIRLHA-SSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGH 125

Query: 182 IITWGHHANRALVPKLVSYYTSFDFLDDAQFIVANTYILSSLPWNILVSSYVNKGCFEEA 361
           II+ G   +  LVPKLV++Y++F+ L DA  I  N+ IL   PWN+L+SSYV  G  ++A
Sbjct: 126 IISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKA 185

Query: 362 I 364
           +
Sbjct: 186 L 186


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/121 (40%), Positives = 68/121 (56%)
 Frame = +2

Query: 2   SLKDFASRGHLSKAFRTFSLIQGHALAXXXXXXXXXXXXXXXXXXXXXXXXREGKQLHAQ 181
           SLK+F SRG+L  AF+T SLI+ HA +                         EG+QLH  
Sbjct: 67  SLKEFTSRGNLLDAFKTVSLIRLHA-SSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGH 125

Query: 182 IITWGHHANRALVPKLVSYYTSFDFLDDAQFIVANTYILSSLPWNILVSSYVNKGCFEEA 361
           II+ G   +  LVPKLV++Y++F+ L DA  I  N+ IL   PWN+L+SSYV  G  ++A
Sbjct: 126 IISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKA 185

Query: 362 I 364
           +
Sbjct: 186 L 186


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