BLASTX nr result

ID: Scutellaria24_contig00031737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031737
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...    56   3e-06

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/72 (41%), Positives = 43/72 (59%)
 Frame = -2

Query: 218 IELPRTVALPNLKVLRLKNFEFSDRNFSGELFLGCPNLETLLLSKCCIRPLNKLKVLDVN 39
           I LP+++ LP+LK L L   +    NF G++F  CPNLE L +   C   LN ++  +++
Sbjct: 162 IALPKSLGLPSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDIC---LNTIENFNIH 214

Query: 38  CSNLKSLEIKYW 3
             NLKSLEI  W
Sbjct: 215 ALNLKSLEILNW 226


>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
 Frame = -2

Query: 425 SNLVMFQLSL--HKDVSLEFIQNCVDYATNHKVQHLRIRGFVKGKPFVXXXXXXXXXXXX 252
           +N+  F+LSL   +D     +++ + YA  H V+ + I       P V            
Sbjct: 93  NNVKAFKLSLDTRRDCQYSVVESLIYYAVKHHVEEISINTAHWDVPIVLPRCFFDCESLR 152

Query: 251 XXXLHNATSNCIELPRTVALPNLKVLRLKNFEFSDRNFSGELFLGCPNLETLLLSKCCIR 72
              L       + LP+++ L +LK L L   +    NF G++F  CPNLE L +   C  
Sbjct: 153 SLKLK--VDGGLALPKSLGLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDIC-- 204

Query: 71  PLNKLKVLDVNCSNLKSLEIKYW 3
            LN ++  +++  +LKSLEI  W
Sbjct: 205 -LNVIENFNIHALSLKSLEILNW 226


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
           gi|222873903|gb|EEF11034.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
 Frame = -2

Query: 425 SNLVMFQLSL--HKDVSLEFIQNCVDYATNHKVQHLRIRGFVKGKPFVXXXXXXXXXXXX 252
           +N+  F+LSL   +D     +++ + YA  H V+ + I       P V            
Sbjct: 112 NNVKAFKLSLDTRRDCQYSVVESLIYYAVKHHVEEISINTAHWDVPIVLPRCFFDCESLR 171

Query: 251 XXXLHNATSNCIELPRTVALPNLKVLRLKNFEFSDRNFSGELFLGCPNLETLLLSKCCIR 72
              L       + LP+++ L +LK L L   +    NF G++F  CPNLE L +   C  
Sbjct: 172 SLKLK--VDGGLALPKSLGLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDIC-- 223

Query: 71  PLNKLKVLDVNCSNLKSLEIKYW 3
            LN ++  +++  +LKSLEI  W
Sbjct: 224 -LNVIENFNIHALSLKSLEILNW 245


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