BLASTX nr result

ID: Scutellaria24_contig00031668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031668
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
emb|CBI25911.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002869013.1| pentatricopeptide repeat-containing protein ...    62   6e-08

>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 31/53 (58%)
 Frame = +1

Query: 1   GTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXXFHCFESGSCSCQDFW 159
           GTP+KVFKNLRTCVDCH                     FHCFE GSCSC+D+W
Sbjct: 672 GTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/53 (52%), Positives = 31/53 (58%)
 Frame = +1

Query: 1   GTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXXFHCFESGSCSCQDFW 159
           GTP+KVFKNLRTCVDCH                     FHCFE GSCSC+D+W
Sbjct: 641 GTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693


>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/53 (50%), Positives = 30/53 (56%)
 Frame = +1

Query: 1   GTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXXFHCFESGSCSCQDFW 159
           GT +KVFKNLRTCVDCH                     FHCFE GSCSC+D+W
Sbjct: 235 GTLIKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 287


>emb|CBI25911.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/53 (50%), Positives = 30/53 (56%)
 Frame = +1

Query: 1   GTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXXFHCFESGSCSCQDFW 159
           GT +KVFKNLRTCVDCH                     FHCFE GSCSC+D+W
Sbjct: 236 GTLIKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 288


>ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314849|gb|EFH45272.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 693

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/53 (47%), Positives = 30/53 (56%)
 Frame = +1

Query: 1   GTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXXFHCFESGSCSCQDFW 159
           GT +KVFKNLR+CVDCH                     FHCFE+G CSC+D+W
Sbjct: 641 GTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQCSCRDYW 693


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