BLASTX nr result

ID: Scutellaria24_contig00031641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031641
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526002.1| protein with unknown function [Ricinus commu...   163   2e-38
ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1...   162   3e-38
ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup1...   155   3e-36
ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicag...   154   7e-36
ref|XP_004164793.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   154   1e-35

>ref|XP_002526002.1| protein with unknown function [Ricinus communis]
           gi|223534734|gb|EEF36426.1| protein with unknown
           function [Ricinus communis]
          Length = 1490

 Score =  163 bits (412), Expect = 2e-38
 Identities = 83/94 (88%), Positives = 86/94 (91%)
 Frame = +3

Query: 6   VLEDKIRSLEKFLRSRRNQRRGLYGCVAGLGDITGSILIGTGSDQVAGDRSMVRNLFGSY 185
           VLE KIRSLEKFLRSRRNQRRGLYGCVAGLGD+TGSIL GTGSD    DRSMVRNLFG+Y
Sbjct: 703 VLESKIRSLEKFLRSRRNQRRGLYGCVAGLGDVTGSILYGTGSDLGTSDRSMVRNLFGAY 762

Query: 186 SRNVESSEGGSSNKRQRLPYSPAELAAMEVRAME 287
           S NVESS GG+SNKRQRLPYSPAELAAMEVRAME
Sbjct: 763 SWNVESSAGGTSNKRQRLPYSPAELAAMEVRAME 796


>ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis
           vinifera]
          Length = 1496

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/94 (85%), Positives = 88/94 (93%)
 Frame = +3

Query: 6   VLEDKIRSLEKFLRSRRNQRRGLYGCVAGLGDITGSILIGTGSDQVAGDRSMVRNLFGSY 185
           VLE+KIR+LEKFLRSRRNQRRGLYGCVAGLGD+TGSIL GTGSD  AGD SMVRNLFG+Y
Sbjct: 708 VLENKIRALEKFLRSRRNQRRGLYGCVAGLGDLTGSILYGTGSDLGAGDNSMVRNLFGAY 767

Query: 186 SRNVESSEGGSSNKRQRLPYSPAELAAMEVRAME 287
           SR++E  +GG+SNKRQRLPYSPAELAAMEVRAME
Sbjct: 768 SRSIEPGDGGTSNKRQRLPYSPAELAAMEVRAME 801


>ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1485

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/94 (82%), Positives = 86/94 (91%)
 Frame = +3

Query: 6   VLEDKIRSLEKFLRSRRNQRRGLYGCVAGLGDITGSILIGTGSDQVAGDRSMVRNLFGSY 185
           VLE K+RSLEKFLRSRRNQRRGLYGCVAGLGD++GSIL G GS   AGDR+MVRNLFG+Y
Sbjct: 702 VLEQKLRSLEKFLRSRRNQRRGLYGCVAGLGDLSGSILYGNGSALGAGDRNMVRNLFGAY 761

Query: 186 SRNVESSEGGSSNKRQRLPYSPAELAAMEVRAME 287
           SRN+ES+ G +SNKRQRLPYSPAELAAMEVRAME
Sbjct: 762 SRNMESNGGRTSNKRQRLPYSPAELAAMEVRAME 795


>ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula]
           gi|355524966|gb|AET05420.1| Nuclear pore complex protein
           Nup155 [Medicago truncatula]
          Length = 1484

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/94 (81%), Positives = 86/94 (91%)
 Frame = +3

Query: 6   VLEDKIRSLEKFLRSRRNQRRGLYGCVAGLGDITGSILIGTGSDQVAGDRSMVRNLFGSY 185
           VLE K+RSLEKFLRSRRNQRRGLYGCVAGLGD++GSIL G GS   AGDRSMVR LFG+Y
Sbjct: 702 VLEHKLRSLEKFLRSRRNQRRGLYGCVAGLGDVSGSILYGGGSALGAGDRSMVRTLFGAY 761

Query: 186 SRNVESSEGGSSNKRQRLPYSPAELAAMEVRAME 287
           S+N+ES+ GG++NKRQRLPYSPAELAAMEVRAME
Sbjct: 762 SKNMESNGGGAANKRQRLPYSPAELAAMEVRAME 795


>ref|XP_004164793.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore complex protein
           Nup155-like, partial [Cucumis sativus]
          Length = 1304

 Score =  154 bits (388), Expect = 1e-35
 Identities = 73/94 (77%), Positives = 89/94 (94%)
 Frame = +3

Query: 6   VLEDKIRSLEKFLRSRRNQRRGLYGCVAGLGDITGSILIGTGSDQVAGDRSMVRNLFGSY 185
           +LE+K+R+LEKFLRSRRNQRRGLYGCVAGLGD+TGSIL G+GSD V+ DR+MV+++FG+Y
Sbjct: 701 ILENKLRALEKFLRSRRNQRRGLYGCVAGLGDVTGSILYGSGSDLVSSDRNMVKSIFGAY 760

Query: 186 SRNVESSEGGSSNKRQRLPYSPAELAAMEVRAME 287
           +RN+ES+  G+SNKRQRLPYSPAELAAMEVRAME
Sbjct: 761 TRNMESAGTGTSNKRQRLPYSPAELAAMEVRAME 794


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