BLASTX nr result

ID: Scutellaria24_contig00031627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031627
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD30822.1| photosystem I P700 apoprotein A1 [Meliosma aff. c...    50   4e-12
gb|ACH47601.1| photosystem I P700 apoprotein A1 [Geranium caroli...    49   5e-12
gb|AEX96037.1| photosystem I P700 apoprotein A1 (chloroplast) [B...    50   5e-12
ref|YP_007507111.1| photosystem I P700 apoprotein A1 (chloroplas...    49   5e-12
gb|AGE93456.1| photosystem I P700 apoprotein A1 [Xiphidium caeru...    49   5e-12

>gb|ADD30822.1| photosystem I P700 apoprotein A1 [Meliosma aff. cuneifolia Moore
           333]
          Length = 750

 Score = 49.7 bits (117), Expect(3) = 4e-12
 Identities = 23/33 (69%), Positives = 24/33 (72%)
 Frame = +2

Query: 167 VISPMYRTNWGIGH*LKDILSAHKVPYTVQAMK 265
           V   MYRTNWGIGH LKDIL AHK P+T Q  K
Sbjct: 304 VAGHMYRTNWGIGHGLKDILEAHKGPFTGQGHK 336



 Score = 33.1 bits (74), Expect(3) = 4e-12
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 238 GPIYSPGHEGLYEILTLAWAGMLN 309
           GP    GH+GLYEILT +W   L+
Sbjct: 328 GPFTGQGHKGLYEILTTSWHAQLS 351



 Score = 32.3 bits (72), Expect(3) = 4e-12
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 300 HAQLSPNLAMLGSLTIV 350
           HAQLS NLAMLGSLTIV
Sbjct: 347 HAQLSLNLAMLGSLTIV 363


>gb|ACH47601.1| photosystem I P700 apoprotein A1 [Geranium carolinianum]
          Length = 752

 Score = 49.3 bits (116), Expect(3) = 5e-12
 Identities = 22/29 (75%), Positives = 23/29 (79%)
 Frame = +2

Query: 179 MYRTNWGIGH*LKDILSAHKVPYTVQAMK 265
           MYRTNWGIGH LKDIL AHK P+T Q  K
Sbjct: 308 MYRTNWGIGHDLKDILEAHKGPFTGQGHK 336



 Score = 33.1 bits (74), Expect(3) = 5e-12
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 238 GPIYSPGHEGLYEILTLAWAGMLN 309
           GP    GH+GLYEILT +W   L+
Sbjct: 328 GPFTGQGHKGLYEILTTSWHAQLS 351



 Score = 32.3 bits (72), Expect(3) = 5e-12
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 300 HAQLSPNLAMLGSLTIV 350
           HAQLS NLAMLGSLTIV
Sbjct: 347 HAQLSLNLAMLGSLTIV 363


>gb|AEX96037.1| photosystem I P700 apoprotein A1 (chloroplast) [Bowiea volubilis]
          Length = 750

 Score = 49.7 bits (117), Expect(3) = 5e-12
 Identities = 23/33 (69%), Positives = 24/33 (72%)
 Frame = +2

Query: 167 VISPMYRTNWGIGH*LKDILSAHKVPYTVQAMK 265
           V   MYRTNWGIGH LKDIL AHK P+T Q  K
Sbjct: 304 VAGHMYRTNWGIGHGLKDILEAHKGPFTGQGHK 336



 Score = 33.1 bits (74), Expect(3) = 5e-12
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 238 GPIYSPGHEGLYEILTLAWAGMLN 309
           GP    GH+GLYEILT +W   L+
Sbjct: 328 GPFTGQGHKGLYEILTTSWHAQLS 351



 Score = 32.0 bits (71), Expect(3) = 5e-12
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 300 HAQLSPNLAMLGSLTIV 350
           HAQLS NLAMLGSLT+V
Sbjct: 347 HAQLSLNLAMLGSLTVV 363


>ref|YP_007507111.1| photosystem I P700 apoprotein A1 (chloroplast) [Salvia
           miltiorrhiza] gi|401879742|gb|AFQ30929.1| photosystem I
           P700 apoprotein A1 (chloroplast) [Salvia miltiorrhiza]
          Length = 750

 Score = 49.3 bits (116), Expect(3) = 5e-12
 Identities = 22/29 (75%), Positives = 23/29 (79%)
 Frame = +2

Query: 179 MYRTNWGIGH*LKDILSAHKVPYTVQAMK 265
           MYRTNWGIGH LKDIL AHK P+T Q  K
Sbjct: 308 MYRTNWGIGHGLKDILEAHKGPFTGQGHK 336



 Score = 33.1 bits (74), Expect(3) = 5e-12
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 238 GPIYSPGHEGLYEILTLAWAGMLN 309
           GP    GH+GLYEILT +W   L+
Sbjct: 328 GPFTGQGHKGLYEILTTSWHAQLS 351



 Score = 32.3 bits (72), Expect(3) = 5e-12
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 300 HAQLSPNLAMLGSLTIV 350
           HAQLS NLAMLGSLTIV
Sbjct: 347 HAQLSLNLAMLGSLTIV 363


>gb|AGE93456.1| photosystem I P700 apoprotein A1 [Xiphidium caeruleum]
          Length = 750

 Score = 49.3 bits (116), Expect(3) = 5e-12
 Identities = 22/29 (75%), Positives = 23/29 (79%)
 Frame = +2

Query: 179 MYRTNWGIGH*LKDILSAHKVPYTVQAMK 265
           MYRTNWGIGH LKDIL AHK P+T Q  K
Sbjct: 308 MYRTNWGIGHGLKDILEAHKGPFTGQGHK 336



 Score = 33.1 bits (74), Expect(3) = 5e-12
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 238 GPIYSPGHEGLYEILTLAWAGMLN 309
           GP    GH+GLYEILT +W   L+
Sbjct: 328 GPFTGQGHKGLYEILTTSWHAQLS 351



 Score = 32.3 bits (72), Expect(3) = 5e-12
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 300 HAQLSPNLAMLGSLTIV 350
           HAQLS NLAMLGSLTIV
Sbjct: 347 HAQLSLNLAMLGSLTIV 363


Top