BLASTX nr result

ID: Scutellaria24_contig00031594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031594
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
emb|CBI20963.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002516590.1| pentatricopeptide repeat-containing protein,...    61   8e-08
ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    60   2e-07
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07

>ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 535

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = +2

Query: 2   KTPGCSLIEVNSAVQEFISGDDSKVFARDVFQILDVLYLHQIKKSDQIEGISN 160
           KTPGCSLIEVN+ VQEF+SGDDSK F+++VF IL  L LHQI+  D IE + +
Sbjct: 474 KTPGCSLIEVNNLVQEFVSGDDSKPFSQEVFWILKGLTLHQIRTKDFIEFVED 526


>emb|CBI20963.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = +2

Query: 2   KTPGCSLIEVNSAVQEFISGDDSKVFARDVFQILDVLYLHQIKKSDQIEGISNE*DSMCS 181
           KTPGCS IEV++ VQE+ SGDDSK F++ ++++L +L +HQ K  D I  I  +  SM  
Sbjct: 243 KTPGCSSIEVDNMVQEYASGDDSKPFSKAIYRVLKLLVMHQSKMDDDIIEIMGKKISMIE 302

Query: 182 NTMIIL--CIWL 211
             +++   CI L
Sbjct: 303 LLLLLRLHCIML 314


>ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544410|gb|EEF45931.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   KTPGCSLIEVNSAVQEFISGDDSKVFARDVFQILDVLYLHQ 124
           KTPGCSLIEVN+  QEF+SGDDSK +++++F +L++L  HQ
Sbjct: 463 KTPGCSLIEVNNVAQEFVSGDDSKPYSKEIFWLLELLAFHQ 503


>ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Vitis vinifera]
          Length = 515

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/48 (54%), Positives = 37/48 (77%)
 Frame = +2

Query: 2   KTPGCSLIEVNSAVQEFISGDDSKVFARDVFQILDVLYLHQIKKSDQI 145
           KTPGCS IEV++ VQE+ SGDDSK F++ ++++L +L +HQ K  D I
Sbjct: 459 KTPGCSSIEVDNMVQEYASGDDSKPFSKAIYRVLKLLVMHQSKMDDDI 506


>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Vitis vinifera]
          Length = 541

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/48 (54%), Positives = 37/48 (77%)
 Frame = +2

Query: 2   KTPGCSLIEVNSAVQEFISGDDSKVFARDVFQILDVLYLHQIKKSDQI 145
           KTPGCS IEV++ VQEF SGDDSK F++ ++++L +L +HQ +  D I
Sbjct: 485 KTPGCSSIEVDNMVQEFASGDDSKPFSKAIYRVLKLLVMHQRRMDDDI 532


Top