BLASTX nr result

ID: Scutellaria24_contig00031556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031556
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595543.1| Pentatricopeptide repeat-containing protein ...    49   1e-06
gb|ABI34394.1| Mutator transposable element-related protein, put...    57   2e-06
gb|ABF97068.1| transposon protein, putative, Mutator sub-class [...    43   3e-06
gb|AAK52158.1|AC084831_12 putative transposon protein [Oryza sat...    43   3e-06
gb|AAP53948.1| transposon protein, putative, Mutator sub-class [...    51   8e-06

>ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484591|gb|AES65794.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 958

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = +3

Query: 18  SKNAFEWLQQRSPTHWSRSHFSFHSKCEELENNTSECFNSMIVKARSK 161
           S+ AF +L +  P HW+R+ F   S C+ L NN SE FN +IV  RSK
Sbjct: 247 SEEAFNYLCEIEPRHWTRALFKGDSNCDTLVNNISEAFNFVIVVPRSK 294



 Score = 28.5 bits (62), Expect(2) = 1e-06
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 164 VSMLETIRMGLMKRFYTNRDQILKY 238
           VSMLE IR+ +M+ +  NR++I KY
Sbjct: 297 VSMLEDIRVYVMEMWQLNREKIAKY 321


>gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum
           tuberosum]
          Length = 616

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/46 (54%), Positives = 30/46 (65%)
 Frame = +3

Query: 24  NAFEWLQQRSPTHWSRSHFSFHSKCEELENNTSECFNSMIVKARSK 161
           NA +WL  + P+ WSRSH S  +KC+ L NN  E FNSMI  AR K
Sbjct: 103 NAVDWLNDKEPSQWSRSHLSSDAKCDILLNNICEVFNSMIFDARDK 148


>gb|ABF97068.1| transposon protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 775

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = +3

Query: 3   EMKLKSKNAFEWLQQRSPTHWSRSHFSFHSKCEELENNTSECFNSMIVKAR 155
           +MK  +K+A+ +L++  P  W R+ F   SKC+ L NN  EC    I++AR
Sbjct: 479 KMKAVNKDAYGYLEEIPPNQWCRAFFRDFSKCDILLNNNLECHVRYILEAR 529



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 152 QIQTVSMLETIRMGLMKRFYTNRDQILKYH*EFCPVV 262
           ++  +SMLE IR  LM R YT +++  K+  + CP +
Sbjct: 530 ELTILSMLEKIRSKLMNRIYTKQEECKKWVFDICPKI 566


>gb|AAK52158.1|AC084831_12 putative transposon protein [Oryza sativa Japonica Group]
           gi|24796791|gb|AAN64468.1| putative mutator-like
           transposase [Oryza sativa Japonica Group]
          Length = 746

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = +3

Query: 3   EMKLKSKNAFEWLQQRSPTHWSRSHFSFHSKCEELENNTSECFNSMIVKAR 155
           +MK  +K+A+ +L++  P  W R+ F   SKC+ L NN  EC    I++AR
Sbjct: 450 KMKAVNKDAYGYLEEIPPNQWCRAFFRDFSKCDILLNNNLECHVRYILEAR 500



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 152 QIQTVSMLETIRMGLMKRFYTNRDQILKYH*EFCPVV 262
           ++  +SMLE IR  LM R YT +++  K+  + CP +
Sbjct: 501 ELTILSMLEKIRSKLMNRIYTKQEECKKWVFDICPKI 537


>gb|AAP53948.1| transposon protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 1005

 Score = 51.2 bits (121), Expect(2) = 8e-06
 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 9   KLKSKNAFEW--LQQRSPTHWSRSHFSFHSKCEELENNTSECFNSMIVKARSK 161
           KL +K    W  L++ +P HWSR+ F   S CE ++NN SE FNS I+++R K
Sbjct: 609 KLAAKTPRGWQDLEKTNPIHWSRAWFRLGSNCESVDNNMSESFNSWIIESRFK 661



 Score = 23.1 bits (48), Expect(2) = 8e-06
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 164 VSMLETIRMGLMKRFYTNRDQILKYH*EFCP 256
           ++MLE IR+ + +R   NR    ++    CP
Sbjct: 664 ITMLEDIRIQVTRRIQENRSNSERWTMTVCP 694


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