BLASTX nr result

ID: Scutellaria24_contig00031539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031539
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat...   182   3e-44
ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat...   182   3e-44
ref|NP_187753.1| pentatricopeptide repeat-containing protein [Ar...   174   5e-42
ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat...   174   5e-42
ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat...   174   9e-42

>ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/120 (70%), Positives = 101/120 (84%)
 Frame = -3

Query: 360 EISAGLFDQMVRTGIQLDRAVFVCVLTACSHAGLTEKGLSYFYSMERIYNLNPGPEHYCC 181
           EI+  LF +M+R+GI+ D   FVCVL+ACSHAGLT++GL YF  M+R Y L PGPEHY C
Sbjct: 327 EIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSC 386

Query: 180 VVDLLSRAGRLTEARNLIESMPMEPDGSVWGALLGACKIHKNVELAELAFNKVVEIEPRN 1
           +VDLL RAGRL EA+ LIESMP++PDG+VWGALLGACKIHKNVELAELAF +V+E+EP N
Sbjct: 387 MVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPEN 446


>ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/120 (70%), Positives = 101/120 (84%)
 Frame = -3

Query: 360 EISAGLFDQMVRTGIQLDRAVFVCVLTACSHAGLTEKGLSYFYSMERIYNLNPGPEHYCC 181
           EI+  LF +M+R+GI+ D   FVCVL+ACSHAGLT++GL YF  M+R Y L PGPEHY C
Sbjct: 336 EIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSC 395

Query: 180 VVDLLSRAGRLTEARNLIESMPMEPDGSVWGALLGACKIHKNVELAELAFNKVVEIEPRN 1
           +VDLL RAGRL EA+ LIESMP++PDG+VWGALLGACKIHKNVELAELAF +V+E+EP N
Sbjct: 396 MVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPEN 455


>ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g11460 gi|12322902|gb|AAG51440.1|AC008153_13
           hypothetical protein; 50785-52656 [Arabidopsis thaliana]
           gi|332641528|gb|AEE75049.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  174 bits (442), Expect = 5e-42
 Identities = 83/120 (69%), Positives = 97/120 (80%)
 Frame = -3

Query: 360 EISAGLFDQMVRTGIQLDRAVFVCVLTACSHAGLTEKGLSYFYSMERIYNLNPGPEHYCC 181
           EI   LFD M++ GI+ D AVFV VL+ACSH+GLT+KGL  F +M+R Y L PGPEHY C
Sbjct: 340 EIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC 399

Query: 180 VVDLLSRAGRLTEARNLIESMPMEPDGSVWGALLGACKIHKNVELAELAFNKVVEIEPRN 1
           +VDLL RAGRL EA   IESMP+EPDG+VWGALLGACKIHKNV++AELAF KV+E EP N
Sbjct: 400 LVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNN 459


>ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Glycine max]
          Length = 630

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/120 (68%), Positives = 98/120 (81%)
 Frame = -3

Query: 360 EISAGLFDQMVRTGIQLDRAVFVCVLTACSHAGLTEKGLSYFYSMERIYNLNPGPEHYCC 181
           E++  LFD+MV + ++ D+ VFV VL+ACSHAGLT++GL YF  MER Y L PGPEHY C
Sbjct: 345 EVALELFDEMVESAVRPDKTVFVSVLSACSHAGLTDRGLEYFKEMERKYGLQPGPEHYSC 404

Query: 180 VVDLLSRAGRLTEARNLIESMPMEPDGSVWGALLGACKIHKNVELAELAFNKVVEIEPRN 1
           VVDLL RAGRL EA NLI+SM ++PDG+VWGALLGACKIHKN E+AELAF  VVE+EP N
Sbjct: 405 VVDLLGRAGRLEEAVNLIKSMKVKPDGAVWGALLGACKIHKNAEIAELAFQHVVELEPTN 464


>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  174 bits (440), Expect = 9e-42
 Identities = 85/120 (70%), Positives = 96/120 (80%)
 Frame = -3

Query: 360 EISAGLFDQMVRTGIQLDRAVFVCVLTACSHAGLTEKGLSYFYSMERIYNLNPGPEHYCC 181
           E++  LFD+M+ +    D A FV VL+ACSHAGLTEKGL YF +MER Y L PGPEHY C
Sbjct: 343 ELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSC 402

Query: 180 VVDLLSRAGRLTEARNLIESMPMEPDGSVWGALLGACKIHKNVELAELAFNKVVEIEPRN 1
           VVDLL RAGRL EAR LI SM +EPDG+VWGALLGACKIH+NVELAELAF KV+E EP N
Sbjct: 403 VVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTN 462


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