BLASTX nr result

ID: Scutellaria24_contig00031335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031335
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-l...    66   3e-09
ref|NP_181303.1| transducin and WD-40 repeat-containing protein ...    66   3e-09
ref|XP_002881542.1| WD-40 repeat family protein [Arabidopsis lyr...    65   8e-09
ref|XP_004142205.1| PREDICTED: uncharacterized protein LOC101206...    61   1e-07
ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communi...    60   1e-07

>ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 912

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/108 (36%), Positives = 58/108 (53%)
 Frame = +3

Query: 3    KTTMTIHAHEHFHCKDVSTAITWPGSSKFEPPLVDLHSKKNTKRASGPPNPATGEKTDNS 182
            K+ +T  +HEHF  +DVS AI WPGS K EPP+V +HSK+++KR+           TD S
Sbjct: 732  KSLVTTRSHEHFQSRDVSVAIPWPGSVKGEPPVVPVHSKRHSKRSGS--TSQEDSSTDGS 789

Query: 183  NIXXXXXXXXXXXTATSEENVTCPDDDHSAQSTAAVDPPGTGSHDPAS 326
            N             ++ +   TCP++    + T+ +D PG GS +  S
Sbjct: 790  N--KAQLPPLPKKNSSLDRMPTCPEE----EMTSCLD-PGIGSSESFS 830


>ref|NP_181303.1| transducin and WD-40 repeat-containing protein [Arabidopsis
           thaliana] gi|3236249|gb|AAC23637.1| putative WD-40
           repeat protein [Arabidopsis thaliana]
           gi|330254338|gb|AEC09432.1| transducin and WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 13/74 (17%)
 Frame = +3

Query: 3   KTTMTIHAHEHFHCKDVSTAITWPGSSKFEPPLVDLHSKKNTKRASGPPNP--------- 155
           ++T+T  +HEHFHCKDVS A+ W G  + EPP V +HSK+++KR S    P         
Sbjct: 717 RSTLTTQSHEHFHCKDVSAAVPWHGHVRGEPPPVQIHSKRHSKRISTSSQPSSTISSPTK 776

Query: 156 ----ATGEKTDNSN 185
               ATG  T N N
Sbjct: 777 EETSATGPTTSNRN 790


>ref|XP_002881542.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327381|gb|EFH57801.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 911

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 26/53 (49%), Positives = 38/53 (71%)
 Frame = +3

Query: 3   KTTMTIHAHEHFHCKDVSTAITWPGSSKFEPPLVDLHSKKNTKRASGPPNPAT 161
           ++T+T  +HEHFHCKDVS A+ W G  + EPP V +HSK+++KR S    P++
Sbjct: 725 RSTLTTQSHEHFHCKDVSAAVPWHGHVRGEPPPVQIHSKRHSKRISTSSQPSS 777


>ref|XP_004142205.1| PREDICTED: uncharacterized protein LOC101206616 [Cucumis sativus]
           gi|449502619|ref|XP_004161695.1| PREDICTED: LOW QUALITY
           PROTEIN: uncharacterized LOC101206616 [Cucumis sativus]
          Length = 934

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/61 (47%), Positives = 36/61 (59%)
 Frame = +3

Query: 3   KTTMTIHAHEHFHCKDVSTAITWPGSSKFEPPLVDLHSKKNTKRASGPPNPATGEKTDNS 182
           K  M I  +EHF CKDVS AI WPG    EPPLV ++SK+++KR    P  A    T + 
Sbjct: 724 KGLMAIRGYEHFPCKDVSVAIPWPGMISGEPPLVQMNSKRHSKRGLTQPASAGSSPTRDE 783

Query: 183 N 185
           N
Sbjct: 784 N 784


>ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communis]
           gi|223532862|gb|EEF34634.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 939

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = +3

Query: 3   KTTMTIHAHEHFHCKDVSTAITWPGSSKFEPPLVDLHSKKNTKRAS 140
           K+ +   +HE+F CKDVS AI WPG+ K +PPLV +HSK+++KR+S
Sbjct: 724 KSIINTRSHENFQCKDVSMAIPWPGTIKGDPPLVKVHSKRHSKRSS 769


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