BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031217
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn...    97   2e-18
gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir...    97   2e-18
gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I...    96   3e-18
gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subu...    94   1e-17
pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate ...    94   1e-17

>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
           Chain A, Crystal Structure Of Geranyl Diphosphate
           Synthase Small Subunit From Antirrhinum Majus
          Length = 273

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/88 (57%), Positives = 65/88 (73%)
 Frame = +1

Query: 4   PNRRPTIQHKYGPNIELLTGDGIIPLGLELLAGSMDSARTCPNKILRVIKEITRAIGSQG 183
           P  +  IQHK+ PNIELLTGDGIIP GLEL+A SMD  R  P++ILR I E+TR +GS+G
Sbjct: 93  PMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELTRVMGSEG 152

Query: 184 MIDGQYNESLGLGQHGIMTDVIELSEYV 267
           +++GQY+E LGL Q     + +EL EYV
Sbjct: 153 IVEGQYHE-LGLNQ----LNDLELIEYV 175


>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
          Length = 297

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/88 (57%), Positives = 65/88 (73%)
 Frame = +1

Query: 4   PNRRPTIQHKYGPNIELLTGDGIIPLGLELLAGSMDSARTCPNKILRVIKEITRAIGSQG 183
           P  +  IQHK+ PNIELLTGDGIIP GLEL+A SMD  R  P++ILR I E+TR +GS+G
Sbjct: 125 PMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELTRVMGSEG 184

Query: 184 MIDGQYNESLGLGQHGIMTDVIELSEYV 267
           +++GQY+E LGL Q     + +EL EYV
Sbjct: 185 IVEGQYHE-LGLNQ----LNDLELIEYV 207


>gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
           miltiorrhiza]
          Length = 314

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/76 (63%), Positives = 56/76 (73%)
 Frame = +1

Query: 1   RPNRRPTIQHKYGPNIELLTGDGIIPLGLELLAGSMDSARTCPNKILRVIKEITRAIGSQ 180
           RPN +P IQHKYGPNIELLTGDG+   G ELLAGS+ S    P +ILRVI EI+RA GS+
Sbjct: 135 RPNSKPAIQHKYGPNIELLTGDGMASFGFELLAGSIRSDHPNPERILRVIIEISRASGSE 194

Query: 181 GMIDGQYNESLGLGQH 228
           G+IDG Y E   + QH
Sbjct: 195 GIIDGFYREKEIVDQH 210


>gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
           gi|10637873|emb|CAC10560.1| gpp synthase small subunit
           [Mentha x piperita]
          Length = 313

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   RPNRRPTIQHKYGPNIELLTGDGIIPLGLELLAGSMDSART-CPNKILRVIKEITRAIGS 177
           RP  +P IQHKYGPN+ELLTGDGI+P G ELLAGS+D ART  P++ILRVI EI+RA G 
Sbjct: 136 RPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGP 195

Query: 178 QGMIDGQYNE 207
           +GMI G + E
Sbjct: 196 EGMISGLHRE 205


>pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium gi|289526779|pdb|3KRA|C Chain C,
           Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium gi|289526782|pdb|3KRC|B Chain B,
           Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp gi|289526783|pdb|3KRC|C Chain C, Mint
           Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp gi|289526786|pdb|3KRF|B Chain B, Mint
           Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (I)
           gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric
           Geranyl Pyrophosphate Synthase In Complex With
           Magnesium, Ipp, And Dmaspp (I) gi|289526790|pdb|3KRO|B
           Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
           Synthase In Complex With Magnesium, Ipp, And Dmaspp (Ii)
           gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric
           Geranyl Pyrophosphate Synthase In Complex With
           Magnesium, Ipp, And Dmaspp (Ii) gi|289526794|pdb|3KRP|B
           Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
           Synthase In Complex With Magnesium And Gpp
           gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric
           Geranyl Pyrophosphate Synthase In Complex With Magnesium
           And Gpp
          Length = 274

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   RPNRRPTIQHKYGPNIELLTGDGIIPLGLELLAGSMDSART-CPNKILRVIKEITRAIGS 177
           RP  +P IQHKYGPN+ELLTGDGI+P G ELLAGS+D ART  P++ILRVI EI+RA G 
Sbjct: 89  RPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGP 148

Query: 178 QGMIDGQYNE 207
           +GMI G + E
Sbjct: 149 EGMISGLHRE 158