BLASTX nr result

ID: Scutellaria24_contig00031200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031200
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321989.1| predicted protein [Populus trichocarpa] gi|2...   217   7e-55
ref|XP_002317787.1| predicted protein [Populus trichocarpa] gi|2...   217   7e-55
ref|XP_002521934.1| nucleic acid binding protein, putative [Rici...   215   3e-54
ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g...   214   8e-54
ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g...   213   2e-53

>ref|XP_002321989.1| predicted protein [Populus trichocarpa] gi|222868985|gb|EEF06116.1|
           predicted protein [Populus trichocarpa]
          Length = 685

 Score =  217 bits (553), Expect = 7e-55
 Identities = 112/154 (72%), Positives = 125/154 (81%)
 Frame = +3

Query: 3   IPGDEERIIEISDTRRRDPDGRLPSFSPAQEALYLIHERILETDVGGLGHNAXXXXXXXX 182
           IPGDEERIIEISDTRRRDP+GR+PSFSPAQEAL+LIH+RILE D   L +          
Sbjct: 125 IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILEND---LQYGVVSSGAGGF 181

Query: 183 XXXXXXXXXXXXVVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDNTLPRCVA 362
                       V TRLVVSRMHVGCLLGKGGKIIEQMRMETKT IRILPRD+TLPRCV+
Sbjct: 182 EEDEYVGRGGNRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVS 241

Query: 363 MSEEIVQVVGDMNAVKNAISVISSRLRESQHRDR 464
           +SEEIVQV+GD+NAVKNA+++ISSRLRESQHRDR
Sbjct: 242 VSEEIVQVIGDVNAVKNAVAIISSRLRESQHRDR 275



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 46/153 (30%), Positives = 73/153 (47%)
 Frame = +3

Query: 3   IPGDEERIIEISDTRRRDPDGRLPSFSPAQEALYLIHERILETDVGGLGHNAXXXXXXXX 182
           + G +E+II I       PD  L    PAQEAL  I  RI++                  
Sbjct: 391 VSGSDEQIITICS--EEGPDDEL---FPAQEALLHIQTRIVDL----------------- 428

Query: 183 XXXXXXXXXXXXVVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDNTLPRCVA 362
                       + TRL+V    +GCL G+ G + E M   T   I ILP++  LP  ++
Sbjct: 429 -----VADKDNIITTRLLVPSSEIGCLEGRDGSLSE-MESLTGATIEILPKE-MLPTYLS 481

Query: 363 MSEEIVQVVGDMNAVKNAISVISSRLRESQHRD 461
            ++E+VQ+ G++ A ++A+  ++SRLR   ++D
Sbjct: 482 GTDELVQIQGEVKAARDALVEVTSRLRSYLYKD 514


>ref|XP_002317787.1| predicted protein [Populus trichocarpa] gi|222858460|gb|EEE96007.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score =  217 bits (553), Expect = 7e-55
 Identities = 113/154 (73%), Positives = 125/154 (81%)
 Frame = +3

Query: 3   IPGDEERIIEISDTRRRDPDGRLPSFSPAQEALYLIHERILETDVGGLGHNAXXXXXXXX 182
           IPGDEERIIEISDTRRRDP+GR+PSFSPAQEAL+LIH+RILE D   L +          
Sbjct: 99  IPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILEND---LQYGVVSSGVGGL 155

Query: 183 XXXXXXXXXXXXVVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDNTLPRCVA 362
                       V TRLVVSRMHVGCLLGKGGKIIEQMRMETKT IRILPRD+TLPRCV+
Sbjct: 156 EEDEYVGRGGNRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVS 215

Query: 363 MSEEIVQVVGDMNAVKNAISVISSRLRESQHRDR 464
           MSEEIVQVVGD++AVKNA+++ISSRLRESQHRDR
Sbjct: 216 MSEEIVQVVGDVSAVKNAVAIISSRLRESQHRDR 249


>ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538859|gb|EEF40458.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 704

 Score =  215 bits (548), Expect = 3e-54
 Identities = 114/154 (74%), Positives = 127/154 (82%)
 Frame = +3

Query: 3   IPGDEERIIEISDTRRRDPDGRLPSFSPAQEALYLIHERILETDVGGLGHNAXXXXXXXX 182
           IPGDEERIIEISDTRRRDP+GR+P+FSPAQEAL+LIH+RILE+D G  G +         
Sbjct: 114 IPGDEERIIEISDTRRRDPEGRMPAFSPAQEALFLIHDRILESD-GQFGMS--YANEEDE 170

Query: 183 XXXXXXXXXXXXVVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDNTLPRCVA 362
                       V TRLVVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPRD+TLPRCV+
Sbjct: 171 YGGRGINNSNNRVATRLVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVS 230

Query: 363 MSEEIVQVVGDMNAVKNAISVISSRLRESQHRDR 464
           MSEEIVQVVGD+NAVKNAI++ISSRLRESQHRDR
Sbjct: 231 MSEEIVQVVGDVNAVKNAIAIISSRLRESQHRDR 264



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 47/153 (30%), Positives = 77/153 (50%)
 Frame = +3

Query: 3   IPGDEERIIEISDTRRRDPDGRLPSFSPAQEALYLIHERILETDVGGLGHNAXXXXXXXX 182
           + G +E++I IS      PD  L    PAQEAL  I   I++                  
Sbjct: 383 VSGSDEQMIIISS--EEGPDDEL---FPAQEALLHIQTHIIDL----------------- 420

Query: 183 XXXXXXXXXXXXVVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDNTLPRCVA 362
                       + T+L+VS   +GCL G+ G + E  R+ T   I+ILPR+  LP CV+
Sbjct: 421 -----VPDSDNIIKTKLIVSSGEIGCLEGRDGSLSEMERL-TGAKIQILPREK-LPACVS 473

Query: 363 MSEEIVQVVGDMNAVKNAISVISSRLRESQHRD 461
            ++E+VQ+ G++ A ++A+  ++SRLR   +++
Sbjct: 474 EADELVQIEGEIKAARDALVEVTSRLRSYLYKE 506


>ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 661

 Score =  214 bits (544), Expect = 8e-54
 Identities = 113/157 (71%), Positives = 125/157 (79%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3   IPGDEERIIEISDTRRRDPDGRLPSFSPAQEALYLIHERILETDVG---GLGHNAXXXXX 173
           IPGDEERIIEISDTRRRDP+GR+P FSPAQEAL++IH+RILE+D G   G G N      
Sbjct: 106 IPGDEERIIEISDTRRRDPEGRMPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDD 165

Query: 174 XXXXXXXXXXXXXXXVVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDNTLPR 353
                          V TR+VVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPRD+ LPR
Sbjct: 166 FGPRGGGNR------VATRMVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPR 219

Query: 354 CVAMSEEIVQVVGDMNAVKNAISVISSRLRESQHRDR 464
           CV+MSEEIVQVVGD+NAVKNAI+ ISSRLRESQHRDR
Sbjct: 220 CVSMSEEIVQVVGDVNAVKNAIANISSRLRESQHRDR 256



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 44/153 (28%), Positives = 74/153 (48%)
 Frame = +3

Query: 3   IPGDEERIIEISDTRRRDPDGRLPSFSPAQEALYLIHERILETDVGGLGHNAXXXXXXXX 182
           + G  E+II I  T    PD  L    PAQEAL  I  RI+                   
Sbjct: 377 VAGSNEQIIVI--TSEEGPDDEL---FPAQEALLHIQTRIVNL----------------- 414

Query: 183 XXXXXXXXXXXXVVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDNTLPRCVA 362
                       + TRL+V    +GC  G+   + E  R+ T  +I+I+PR+  LP  ++
Sbjct: 415 -----LPDKENVITTRLLVPSSEIGCFEGRDCSLSEMRRL-TGANIQIVPREQ-LPAFIS 467

Query: 363 MSEEIVQVVGDMNAVKNAISVISSRLRESQHRD 461
            ++E++++VG++ A ++A+  ++SRLR   +R+
Sbjct: 468 GTDELLEIVGEIKAARDALVEVTSRLRSYLYRE 500


>ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus] gi|449517605|ref|XP_004165836.1| PREDICTED: KH
           domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 666

 Score =  213 bits (541), Expect = 2e-53
 Identities = 110/159 (69%), Positives = 126/159 (79%), Gaps = 5/159 (3%)
 Frame = +3

Query: 3   IPGDEERIIEISDTRRRDPDGRLPSFSPAQEALYLIHERILETDVG----GLGHNAXXXX 170
           +PGDEERIIEISDTRRRDP+GR+PSFSPAQEAL+LIHERILE+++     G+G+      
Sbjct: 99  VPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEE 158

Query: 171 XXXXXXXXXXXXXXXX-VVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDNTL 347
                            V TRLVVSRMHVGCLLGKGGKIIEQMRMETKT IRILPRD+ L
Sbjct: 159 DDYGGVRGGGGGGCGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNL 218

Query: 348 PRCVAMSEEIVQVVGDMNAVKNAISVISSRLRESQHRDR 464
           PRC++MSEEIVQ+VGD NAVK AI+++SSRLRESQHRDR
Sbjct: 219 PRCISMSEEIVQIVGDTNAVKKAIAIVSSRLRESQHRDR 257



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 47/153 (30%), Positives = 78/153 (50%)
 Frame = +3

Query: 3   IPGDEERIIEISDTRRRDPDGRLPSFSPAQEALYLIHERILETDVGGLGHNAXXXXXXXX 182
           + G  E+I+ IS      PD  L    PAQEAL  I  RI++                  
Sbjct: 373 VTGSNEQILIISSDE--GPDDEL---FPAQEALLHIQTRIVDL----------------- 410

Query: 183 XXXXXXXXXXXXVVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDNTLPRCVA 362
                       V TRL+V    +GCL G+ G ++E  R+ T  ++ I+PR++ LP  V+
Sbjct: 411 -----VPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRL-TGANVHIVPRED-LPMFVS 463

Query: 363 MSEEIVQVVGDMNAVKNAISVISSRLRESQHRD 461
            ++E+VQ++GD+ A ++A+  ++SRLR   +++
Sbjct: 464 GADELVQIIGDIKAARDALVELTSRLRNCLYKE 496


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