BLASTX nr result

ID: Scutellaria24_contig00031189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031189
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    70   1e-10

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 54/154 (35%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
 Frame = -1

Query: 405 QSFAPPYPMHFRPATQATQGQQYMPPQGAQQYHPGGQ---AQNVGMXXXXXXXXXXXXXX 235
           Q+F PP  M FRPA    QG  ++ P  +QQ+ P GQ   + NVG               
Sbjct: 24  QNFGPPLSMQFRPAVPGQQGHPFI-PAASQQFRPIGQNISSPNVGGPSGQNQPPQFSQAM 82

Query: 234 XXXXPRPGQPGHAAPSSYP------QSSMPISPGMAQPHSTPP---SH-------GVSFX 103
               PRP QPG  APSS P      Q + P++    QP+ T P   SH       G+ F 
Sbjct: 83  QQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQPNQTAPPLNSHMPGLAGPGMPFS 142

Query: 102 XXXXXXXXXYGLPQSSIGMPPQVHPSSQMSAPFG 1
                    +G PQS+I    Q  P SQM AP G
Sbjct: 143 SSYTFAPASFGQPQSTINASAQFQPISQMHAPVG 176


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 50/144 (34%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
 Frame = -1

Query: 405 QSFAPPYPMHFRPATQATQGQQYMPPQGAQQYHPGGQ---AQNVGMXXXXXXXXXXXXXX 235
           Q+F PP  M FRPA    QG  ++ P  +QQ+ P GQ   + NVG               
Sbjct: 38  QNFGPPLSMQFRPAVPGQQGHPFI-PAASQQFRPIGQNISSPNVGGPSGQNQPPQFSQAM 96

Query: 234 XXXXPRPGQPGHAAPSSYP------QSSMPISPGMAQPHSTPPSHGVSFXXXXXXXXXXY 73
               PRP QPG  APSS P      Q + P++    QP+ T P   ++           +
Sbjct: 97  QQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQPNQTAPP--LNSHMPGLFAPASF 154

Query: 72  GLPQSSIGMPPQVHPSSQMSAPFG 1
           G PQS+I    Q  P SQM AP G
Sbjct: 155 GQPQSTINASAQFQPISQMHAPVG 178


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