BLASTX nr result

ID: Scutellaria24_contig00031136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031136
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234192.1| auxin efflux facilitator SlPIN5 [Solanum lyc...   121   7e-26
ref|XP_002272306.1| PREDICTED: putative auxin efflux carrier com...   117   1e-24
ref|XP_002329004.1| auxin efflux carrier component [Populus tric...   117   1e-24
ref|XP_002325466.1| auxin efflux carrier component [Populus tric...   116   2e-24
ref|XP_002279191.1| PREDICTED: putative auxin efflux carrier com...   115   5e-24

>ref|NP_001234192.1| auxin efflux facilitator SlPIN5 [Solanum lycopersicum]
           gi|312983232|gb|ADR30412.1| auxin efflux facilitator
           SlPIN5 [Solanum lycopersicum]
          Length = 358

 Score =  121 bits (303), Expect = 7e-26
 Identities = 52/98 (53%), Positives = 63/98 (64%)
 Frame = +3

Query: 51  MIEWRDVYKVVEAMVPLYVPLALGYASVRWWRMFKPDHCDAINRFNCYFIIPFFTFQFTA 230
           MI W D+YKVV  M+PLYV L LGY SV+WW MFKP+ CD INRFNC+FI+PFF FQF A
Sbjct: 1   MIGWDDIYKVVVGMMPLYVALILGYGSVKWWHMFKPEQCDTINRFNCFFILPFFNFQFIA 60

Query: 231 GVDPYAMNFRFLXXXXXXXXXXXXXXXXWVNFGRNGDF 344
            ++PY +N+ FL                W NF + G F
Sbjct: 61  KINPYNLNYLFLSGDVIAKALVILILVLWANFYKKGSF 98


>ref|XP_002272306.1| PREDICTED: putative auxin efflux carrier component 8 [Vitis
           vinifera] gi|297735277|emb|CBI17639.3| unnamed protein
           product [Vitis vinifera]
          Length = 361

 Score =  117 bits (292), Expect = 1e-24
 Identities = 49/72 (68%), Positives = 59/72 (81%)
 Frame = +3

Query: 51  MIEWRDVYKVVEAMVPLYVPLALGYASVRWWRMFKPDHCDAINRFNCYFIIPFFTFQFTA 230
           MIEW DVYKVVEAM PLYV L LGYASVRWW MF  D C AINRF CYFI PF++F FT+
Sbjct: 1   MIEWGDVYKVVEAMAPLYVALLLGYASVRWWHMFSSDQCAAINRFICYFIFPFYSFDFTS 60

Query: 231 GVDPYAMNFRFL 266
            +DP++MN++++
Sbjct: 61  HIDPFSMNYKYM 72


>ref|XP_002329004.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222839238|gb|EEE77589.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 346

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/98 (53%), Positives = 61/98 (62%)
 Frame = +3

Query: 51  MIEWRDVYKVVEAMVPLYVPLALGYASVRWWRMFKPDHCDAINRFNCYFIIPFFTFQFTA 230
           MI W DVYKVV AMVPLYV L LGY SVRWW++F P+ C AINRF CYF +P FTF+FTA
Sbjct: 1   MIGWEDVYKVVVAMVPLYVALVLGYGSVRWWKVFTPEQCGAINRFVCYFTLPLFTFEFTA 60

Query: 231 GVDPYAMNFRFLXXXXXXXXXXXXXXXXWVNFGRNGDF 344
            VDP+ MN+RF+                W      G +
Sbjct: 61  HVDPFKMNYRFIGADAVSKVIIVVVLAFWAKCSSKGSY 98


>ref|XP_002325466.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222862341|gb|EEE99847.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 346

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/98 (52%), Positives = 62/98 (63%)
 Frame = +3

Query: 51  MIEWRDVYKVVEAMVPLYVPLALGYASVRWWRMFKPDHCDAINRFNCYFIIPFFTFQFTA 230
           MI W D+YKVV AMVPLYV L LGY SVRWW++F P+ C AINRF CYF +PFFTF+FTA
Sbjct: 1   MIGWADIYKVVVAMVPLYVALMLGYGSVRWWKVFTPEQCGAINRFVCYFTLPFFTFEFTA 60

Query: 231 GVDPYAMNFRFLXXXXXXXXXXXXXXXXWVNFGRNGDF 344
            VDP+ MN+ F+                W  +   G +
Sbjct: 61  HVDPFKMNYLFIGADAISKLIIVVVLAVWAKWSGKGSY 98


>ref|XP_002279191.1| PREDICTED: putative auxin efflux carrier component 8 [Vitis
           vinifera] gi|297735290|emb|CBI17652.3| unnamed protein
           product [Vitis vinifera]
          Length = 356

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/98 (52%), Positives = 60/98 (61%)
 Frame = +3

Query: 51  MIEWRDVYKVVEAMVPLYVPLALGYASVRWWRMFKPDHCDAINRFNCYFIIPFFTFQFTA 230
           MI W DVYKVV AM+PLYV L LGY SV+WWR+F PD CDAINR  CYF +P FTF+FTA
Sbjct: 1   MIGWEDVYKVVVAMLPLYVALVLGYGSVKWWRIFTPDQCDAINRLVCYFTLPLFTFEFTA 60

Query: 231 GVDPYAMNFRFLXXXXXXXXXXXXXXXXWVNFGRNGDF 344
            VDP+ MN+ F+                W      G +
Sbjct: 61  HVDPFKMNYLFIGADAVSKLIIVLVLALWAKCSSKGSY 98


Top