BLASTX nr result

ID: Scutellaria24_contig00031092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031092
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19924.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,...   114   8e-24
ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20

>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/73 (69%), Positives = 63/73 (86%)
 Frame = -1

Query: 221 DEMPERTVISWNVMLAGYTRNLEWEKALEFVILMRSKTKDVDHVSLGLILNICAAIPDME 42
           DEMPER+VISWN MLAGYT   +WE+ALEFV LMR  T+D+DHV++GLILN+CA + D+E
Sbjct: 352 DEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVE 411

Query: 41  LGKQVHGYVYRHG 3
            GKQVHG++YRHG
Sbjct: 412 SGKQVHGFIYRHG 424


>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/73 (69%), Positives = 63/73 (86%)
 Frame = -1

Query: 221 DEMPERTVISWNVMLAGYTRNLEWEKALEFVILMRSKTKDVDHVSLGLILNICAAIPDME 42
           DEMPER+VISWN MLAGYT   +WE+ALEFV LMR  T+D+DHV++GLILN+CA + D+E
Sbjct: 352 DEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVE 411

Query: 41  LGKQVHGYVYRHG 3
            GKQVHG++YRHG
Sbjct: 412 SGKQVHGFIYRHG 424


>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 718

 Score =  114 bits (285), Expect = 8e-24
 Identities = 46/73 (63%), Positives = 64/73 (87%)
 Frame = -1

Query: 221 DEMPERTVISWNVMLAGYTRNLEWEKALEFVILMRSKTKDVDHVSLGLILNICAAIPDME 42
           ++MPE +V+SWN MLAGY R+L+WE+AL+FV LMR  T+D+DH++LGL+LN+CA I D+E
Sbjct: 349 EKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVE 408

Query: 41  LGKQVHGYVYRHG 3
           +GKQ HG++YRHG
Sbjct: 409 MGKQAHGFIYRHG 421


>ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Glycine max]
          Length = 698

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/73 (71%), Positives = 59/73 (80%)
 Frame = -1

Query: 221 DEMPERTVISWNVMLAGYTRNLEWEKALEFVILMRSKTKDVDHVSLGLILNICAAIPDME 42
           DEMPER VISWN MLAGYT+  EW KAL+FV LM    KDVDHV+LGL+LN+ A I D E
Sbjct: 355 DEMPERNVISWNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDHVTLGLLLNVSAGISDHE 414

Query: 41  LGKQVHGYVYRHG 3
           +GKQVHGY+YRHG
Sbjct: 415 MGKQVHGYIYRHG 427


>ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|222843933|gb|EEE81480.1|
           predicted protein [Populus trichocarpa]
          Length = 709

 Score =  102 bits (255), Expect = 2e-20
 Identities = 40/73 (54%), Positives = 62/73 (84%)
 Frame = -1

Query: 221 DEMPERTVISWNVMLAGYTRNLEWEKALEFVILMRSKTKDVDHVSLGLILNICAAIPDME 42
           DEMPER ++S+N +LAGY R+L+WE+AL+FV LM   T+++DH++  L+LN+C+ + D++
Sbjct: 349 DEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVCSGLSDVD 408

Query: 41  LGKQVHGYVYRHG 3
           +GKQVHG++YRHG
Sbjct: 409 MGKQVHGFIYRHG 421


Top