BLASTX nr result

ID: Scutellaria24_contig00031064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031064
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36057.3| unnamed protein product [Vitis vinifera]               98   8e-19
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...    91   8e-17
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...    86   2e-15
ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair ...    86   4e-15
ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...    78   9e-13

>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/105 (49%), Positives = 69/105 (65%)
 Frame = -3

Query: 316  MTAMKKAVGSCSKESQEIIISKAFGVLSSSTGFGSMLIESGCSTIKEEGLQQTSKFGNSS 137
            MTAMK AVGSCS+ SQ  II KA+ VLSS   F  M       T++ EGLQ T      S
Sbjct: 713  MTAMKLAVGSCSEGSQGKIIKKAYSVLSSCPSFTLMESMPITGTVQLEGLQHTQDLECFS 772

Query: 136  NRDEWITSLFASVVVALHPQTSIPNGKMIVQMFIKSLLNGHGPSA 2
             RD+W+ SLFAS ++A+ PQT IPN ++++ +F+ +LL GH P+A
Sbjct: 773  CRDKWVISLFASAIIAVRPQTHIPNIRVVLHLFMTNLLKGHVPAA 817


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 50/105 (47%), Positives = 69/105 (65%)
 Frame = -3

Query: 316  MTAMKKAVGSCSKESQEIIISKAFGVLSSSTGFGSMLIESGCSTIKEEGLQQTSKFGNSS 137
            M  MK AV  CS ESQ +II KA+GVLSSST F  +      ++++ E  +   +    S
Sbjct: 728  MKVMKDAVAFCSVESQNVIIYKAYGVLSSST-FLPLKESLSENSVQLECFRAIQQMDRLS 786

Query: 136  NRDEWITSLFASVVVALHPQTSIPNGKMIVQMFIKSLLNGHGPSA 2
            +RDEWI SLFASV++AL PQT IPN ++++ +FI +LL GH  +A
Sbjct: 787  SRDEWIHSLFASVIIALRPQTHIPNTRIVLHLFITALLKGHVTTA 831


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/105 (43%), Positives = 67/105 (63%)
 Frame = -3

Query: 316  MTAMKKAVGSCSKESQEIIISKAFGVLSSSTGFGSMLIESGCSTIKEEGLQQTSKFGNSS 137
            M A+K +V SCSKESQ II+ KAF VL +S+     +  S    ++ EGLQ   +  N +
Sbjct: 707  MMALKLSVRSCSKESQNIIVQKAFNVLLTSSFSPLKVTLSNTIPVQMEGLQFLQQKDNPT 766

Query: 136  NRDEWITSLFASVVVALHPQTSIPNGKMIVQMFIKSLLNGHGPSA 2
            +RDEWI SLFASV +AL PQ  +P+ ++I+++ + S   G  P+A
Sbjct: 767  SRDEWILSLFASVTIALRPQVHVPDVRLIIRLLMLSTTRGCVPAA 811


>ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Cucumis sativus]
          Length = 914

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/105 (43%), Positives = 67/105 (63%)
 Frame = -3

Query: 316 MTAMKKAVGSCSKESQEIIISKAFGVLSSSTGFGSMLIESGCSTIKEEGLQQTSKFGNSS 137
           M A+K +V SCSKESQ II+ KAF VL +S+     +  S    ++ EGLQ   +  N +
Sbjct: 491 MMALKLSVRSCSKESQNIIVQKAFNVLLASSFSPLKVALSTTIPVQMEGLQFLQQKDNPT 550

Query: 136 NRDEWITSLFASVVVALHPQTSIPNGKMIVQMFIKSLLNGHGPSA 2
           +RDEWI SLFASV +AL PQ  +P+ ++I+++ + S   G  P+A
Sbjct: 551 SRDEWILSLFASVTIALRPQVHVPDVRLIIRLLMLSTTRGCVPAA 595


>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
 Frame = -3

Query: 316 MTAMKKAVGSCSKESQEIIISKAFGVLSSSTGFGSMLIESGCSTIKE-EGLQQTSKFGNS 140
           M AM+ +VGSCS ESQ +II KA+ VLSS T F           +KE E L  T    + 
Sbjct: 707 MKAMRLSVGSCSVESQNLIIRKAYSVLSSHTNF----------QLKEVERLPLTPGKYDI 756

Query: 139 SNRDEWITSLFASVVVALHPQTSIPNGKMIVQMFIKSLLNGHGPSA 2
           S RDE I SLFASVV+A+ P+T IPN +++V +FI +LL G  P A
Sbjct: 757 SLRDEGIISLFASVVIAVCPKTYIPNIRVLVHLFIITLLRGVVPVA 802


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