BLASTX nr result

ID: Scutellaria24_contig00031061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00031061
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268231.1| PREDICTED: uncharacterized protein C57A7.06 ...    60   2e-07
gb|AAC19284.1| T14P8.20 [Arabidopsis thaliana] gi|7269000|emb|CA...    57   2e-06
ref|NP_567232.3| U3 ribonucleoprotein-like protein [Arabidopsis ...    57   2e-06
dbj|BAF02036.1| hypothetical protein [Arabidopsis thaliana]            57   2e-06

>ref|XP_002268231.1| PREDICTED: uncharacterized protein C57A7.06 [Vitis vinifera]
           gi|297743903|emb|CBI36873.3| unnamed protein product
           [Vitis vinifera]
          Length = 895

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
 Frame = +3

Query: 12  KRRRGPRLPNAFLKKELNIQRRD---AGGEPSXXXXXXXXXXXXXYXXXXXXXXXXSKKN 182
           K+R GPRLP+  L+KEL++   +    GG+               Y          SKKN
Sbjct: 30  KKRTGPRLPSK-LRKELDLVNPNPLKGGGDEEINSDEGELLANNLYEYEEAAAEEESKKN 88

Query: 183 RRFDPVENFEFELPEDFEDWKVPS 254
           RRFD VENFE+ELPEDF+D  + S
Sbjct: 89  RRFDSVENFEYELPEDFKDENIAS 112


>gb|AAC19284.1| T14P8.20 [Arabidopsis thaliana] gi|7269000|emb|CAB80733.1|
           AT4g02400 [Arabidopsis thaliana]
          Length = 870

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 42/83 (50%)
 Frame = +3

Query: 6   EKKRRRGPRLPNAFLKKELNIQRRDAGGEPSXXXXXXXXXXXXXYXXXXXXXXXXSKKNR 185
           + K+R+GP LPN+ LK   N ++R    +               Y          SKKN 
Sbjct: 14  KNKKRKGPHLPNSILKTIAN-EKRPLNSDEDDDEIDSDDENVDLYEYEEGVPEEESKKNN 72

Query: 186 RFDPVENFEFELPEDFEDWKVPS 254
           R+D V+N+++ELPEDFED  V S
Sbjct: 73  RYDRVDNYDYELPEDFEDENVES 95


>ref|NP_567232.3| U3 ribonucleoprotein-like protein [Arabidopsis thaliana]
           gi|332656764|gb|AEE82164.1| U3 ribonucleoprotein-like
           protein [Arabidopsis thaliana]
          Length = 855

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 42/83 (50%)
 Frame = +3

Query: 6   EKKRRRGPRLPNAFLKKELNIQRRDAGGEPSXXXXXXXXXXXXXYXXXXXXXXXXSKKNR 185
           + K+R+GP LPN+ LK   N ++R    +               Y          SKKN 
Sbjct: 14  KNKKRKGPHLPNSILKTIAN-EKRPLNSDEDDDEIDSDDENVDLYEYEEGVPEEESKKNN 72

Query: 186 RFDPVENFEFELPEDFEDWKVPS 254
           R+D V+N+++ELPEDFED  V S
Sbjct: 73  RYDRVDNYDYELPEDFEDENVES 95


>dbj|BAF02036.1| hypothetical protein [Arabidopsis thaliana]
          Length = 855

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 42/83 (50%)
 Frame = +3

Query: 6   EKKRRRGPRLPNAFLKKELNIQRRDAGGEPSXXXXXXXXXXXXXYXXXXXXXXXXSKKNR 185
           + K+R+GP LPN+ LK   N ++R    +               Y          SKKN 
Sbjct: 14  KNKKRKGPHLPNSILKTIAN-EKRPLNSDEDDDEIDSDDENVDLYEYEEGVPEEESKKNN 72

Query: 186 RFDPVENFEFELPEDFEDWKVPS 254
           R+D V+N+++ELPEDFED  V S
Sbjct: 73  RYDRVDNYDYELPEDFEDENVES 95


Top