BLASTX nr result

ID: Scutellaria24_contig00030979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030979
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat...   113   1e-23
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...   107   8e-22
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat...   100   2e-19
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19

>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/93 (54%), Positives = 68/93 (73%)
 Frame = +3

Query: 3    RAGKLEDASALMEEIGTERNLLDQYTFGSFIHXXXXXXXXXXXXVKINCMKQLGIHPTVH 182
            RAG+LE+A AL++E+G ER  LDQY +GS +H             K++ MKQ+GIHPTVH
Sbjct: 850  RAGRLEEALALVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSMKQIGIHPTVH 909

Query: 183  VYTALIIHFFKEKDINRAFETLEEMKEQGCMPT 281
            VYT+LI+HFFKEK + +A ET ++MKE+GC PT
Sbjct: 910  VYTSLIVHFFKEKQMRKALETFQKMKEEGCEPT 942


>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/93 (50%), Positives = 67/93 (72%)
 Frame = +3

Query: 3    RAGKLEDASALMEEIGTERNLLDQYTFGSFIHXXXXXXXXXXXXVKINCMKQLGIHPTVH 182
            R+G+LE+A +L++E+GTER+ LDQYT+G+ +H             KI  MK+ GI+PTVH
Sbjct: 872  RSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVH 931

Query: 183  VYTALIIHFFKEKDINRAFETLEEMKEQGCMPT 281
            VYT+LI+HFFKEK I +A +  E+M++ GC PT
Sbjct: 932  VYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPT 964


>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/93 (50%), Positives = 62/93 (66%)
 Frame = +3

Query: 3    RAGKLEDASALMEEIGTERNLLDQYTFGSFIHXXXXXXXXXXXXVKINCMKQLGIHPTVH 182
            RAGK+E+A AL EE+G E+ ++DQ TFGS +H             K++ MKQ GI PT+H
Sbjct: 834  RAGKVEEALALHEEVGEEKFIIDQLTFGSIVHGLLRKGRLEEALAKVDVMKQNGITPTIH 893

Query: 183  VYTALIIHFFKEKDINRAFETLEEMKEQGCMPT 281
            V+T+LI+HFFKEK + +A ET EEM   G  PT
Sbjct: 894  VFTSLIVHFFKEKQVEKAIETFEEMLHSGYEPT 926


>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/93 (47%), Positives = 64/93 (68%)
 Frame = +3

Query: 3    RAGKLEDASALMEEIGTERNLLDQYTFGSFIHXXXXXXXXXXXXVKINCMKQLGIHPTVH 182
            RAG LE+A +L++++ TE+  LD+YT  S +H             K++ MKQ+GI+PTVH
Sbjct: 849  RAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVH 908

Query: 183  VYTALIIHFFKEKDINRAFETLEEMKEQGCMPT 281
            VYT+LI+HFF+EK  ++A E  E MK++GC PT
Sbjct: 909  VYTSLIVHFFREKLASKALEIFESMKQEGCEPT 941


>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/93 (47%), Positives = 64/93 (68%)
 Frame = +3

Query: 3    RAGKLEDASALMEEIGTERNLLDQYTFGSFIHXXXXXXXXXXXXVKINCMKQLGIHPTVH 182
            RAG LE+A +L++++ TE+  LD+YT  S +H             K++ MKQ+GI+PTVH
Sbjct: 849  RAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVH 908

Query: 183  VYTALIIHFFKEKDINRAFETLEEMKEQGCMPT 281
            VYT+LI+HFF+EK  ++A E  E MK++GC PT
Sbjct: 909  VYTSLIVHFFREKLASKALEIFESMKQEGCEPT 941


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