BLASTX nr result

ID: Scutellaria24_contig00030969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00030969
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]   139   2e-31
ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|NP_188050.1| pentatricopeptide repeat-containing protein [Ar...   118   6e-25

>ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|222843383|gb|EEE80930.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  147 bits (370), Expect = 1e-33
 Identities = 68/109 (62%), Positives = 88/109 (80%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGEEPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRNV 149
           LKAC+ + +   GR VHAQV+K+ E PDQVV+N LL+ YT+C  F+EV  VFD MP+RNV
Sbjct: 37  LKACADLRELWVGRGVHAQVVKSSEGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNV 96

Query: 148 ATWNALVSGFVKKDQFVEALETFRKMQRDKMGFSWVSLTTVLAICARFT 2
           A+WN+L+SGFVK+D+  EAL+ FR+MQR+ MGFSWV+LTT+L ICAR T
Sbjct: 97  ASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVT 145



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/86 (30%), Positives = 49/86 (56%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGEEPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRNV 149
           L  C+ V    +G+ +HAQ++K+   PD +V N+L+  Y +CG  D    +FD M  +++
Sbjct: 138 LPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDL 197

Query: 148 ATWNALVSGFVKKDQFVEALETFRKM 71
            +WN +++G+        A++ F +M
Sbjct: 198 TSWNTMLTGYAINGYMRVAMDLFNEM 223


>ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/109 (63%), Positives = 84/109 (77%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGEEPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRNV 149
           LKACS + D + GRAVHAQV+KA E+PDQVV+NALL+ Y+E G FDE   VFD MP RNV
Sbjct: 185 LKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNV 244

Query: 148 ATWNALVSGFVKKDQFVEALETFRKMQRDKMGFSWVSLTTVLAICARFT 2
            +WN+L++G VKKD   EA+E FR MQ   MGFSWV+LTT+L +CAR T
Sbjct: 245 VSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVT 293



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/106 (28%), Positives = 60/106 (56%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGEEPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRNV 149
           L  C+ V    +G+ +HA ++K+  +PD  V N+L+  Y +CG+ D    VF+ M  +++
Sbjct: 286 LPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDL 345

Query: 148 ATWNALVSGFVKKDQFVEALETFRKMQRDKMGFSWVSLTTVLAICA 11
            +WN L++G+    +  EA+E+F++M         ++   +L+ C+
Sbjct: 346 TSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCS 391


>emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
          Length = 773

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/109 (60%), Positives = 84/109 (77%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGEEPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRNV 149
           LKACS + D R GRAVHAQV+KA E+PDQVV+NALL+ Y+E G F+E   +FD MP RN+
Sbjct: 184 LKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRNL 243

Query: 148 ATWNALVSGFVKKDQFVEALETFRKMQRDKMGFSWVSLTTVLAICARFT 2
            +WN+L++G VKK+   EA+E FR MQ   MGFSWV+LTT+L +CAR T
Sbjct: 244 VSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVT 292



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/106 (28%), Positives = 60/106 (56%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGEEPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRNV 149
           L  C+ V    +G+ +HA ++K+  +PD  V N+L+  Y +CG+ D    VF+ M  +++
Sbjct: 285 LPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDL 344

Query: 148 ATWNALVSGFVKKDQFVEALETFRKMQRDKMGFSWVSLTTVLAICA 11
            +WN L++G+    +  EA+E+F++M         ++   +L+ C+
Sbjct: 345 TSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCS 390


>ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 650

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/110 (53%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGE-EPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRN 152
           LKACS + +   GRA+HAQ++K    E DQVV+NALL  Y E G FDEV  VF++MP RN
Sbjct: 182 LKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRN 241

Query: 151 VATWNALVSGFVKKDQFVEALETFRKMQRDKMGFSWVSLTTVLAICARFT 2
           V +WN L++GF  + +  E L  FR MQR+ MGFSW++LTT+L +CA+ T
Sbjct: 242 VVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVT 291



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/106 (28%), Positives = 57/106 (53%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGEEPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRNV 149
           L  C+ V    +G+ +H Q++K+ +  D  + N+L+  Y +CG       VFD M  +++
Sbjct: 284 LPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDL 343

Query: 148 ATWNALVSGFVKKDQFVEALETFRKMQRDKMGFSWVSLTTVLAICA 11
            +WN +++GF    Q  EAL  F +M R  +  + ++   +L+ C+
Sbjct: 344 TSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCS 389


>ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g14330 gi|332641981|gb|AEE75502.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/107 (52%), Positives = 72/107 (67%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGEEPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRNV 149
           LKAC  + D R GR +HAQ++K  E+ DQVV+N LLK Y E G FD+   VFD M +RNV
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302

Query: 148 ATWNALVSGFVKKDQFVEALETFRKMQRDKMGFSWVSLTTVLAICAR 8
            TWN+L+S   KK +  E    FRKMQ + +GFSW +LTT+L  C+R
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSR 349



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/106 (28%), Positives = 56/106 (52%)
 Frame = -2

Query: 328 LKACSAVLDTRNGRAVHAQVIKAGEEPDQVVHNALLKFYTECGSFDEVSTVFDDMPDRNV 149
           L ACS V     G+ +HAQ++K+ E+PD  + N+L+  Y +CG  +    VFD M  +++
Sbjct: 344 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDL 403

Query: 148 ATWNALVSGFVKKDQFVEALETFRKMQRDKMGFSWVSLTTVLAICA 11
           A+WN +++ +       E +  F  M    +    ++   +L+ C+
Sbjct: 404 ASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449


Top